Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06835 ATGAAACTTCATTACCTTTCCTTGTTCCTTCTTTTGATCATCTTGGAGCTGAGCACCATCTATGGCCTCTCTGCACAAGCAAATGTGCCCAAGAAATCATTGAAGTCCTTACCTCCTGAAGCCTTGCTTTCCATTGCTCACTATCATAGAACATGCCCAGATGCTGAAGGCATTATCTCACAAAAGGTTGCTGCTTGGGTTAAGAAGGACCCCACCTTGGCCCCTGCCATCATCCGCCTGCATTTCCATGACTGTGCCATTAGAGGGTGTGATGGATCAGTTTTGCTTAACCACTCAGGGAGTGAGAGGACTGCTTTTGAGAGCAAAACCCTGAGAGGTTTCCAATTGATTGATGATATCAAGGCTGAGTTAGAGAGGAGGTGTCCAAGAACTGTCTCTTGTGCTGACATTCTCACTGCTGCTGCAAGAGATGCCACCATTTTAGCTGGAGGACCATTCTGGGAAGTCCCATTTGGCCGTAAAGATGGCAGGATTTCCTTAGCCAAAGAAGCCACTTTGGTTCCCAAGGGCCATGAAAACATCACATCTTTGCTTAATTTTTTTCAAGAAAGAGGGCTAGACATGCTTGATTTGGTTACTCTCTCAGGTTCACACACAATTGGGAGGAGCACTTGCTATTCTTTTATGGATAGGATTTACAACTTCAATGGCACTGGAAAGCCTGATCCTTCACTCAATGTTTATTACTTGAAGTTGTTGAGGAAAAGATGTAAAAGTGTGTTGGATTTGGTGTACCTTGATGTTACAACCCCAAGGACTTTTGACACAACCTATTACACAAACCTTAAGAGGAAGGTGGGGTTGTTGTCAACAGATCAATCATTGTTTTCAGATGCAAGGACAGCTCCTTTTGTGGAAGCATTTGCAACACAACCTTTCCTTTTCACTAGCCAGTTTGCAGTGTCAATGGTGAAGCTTGGGAATGTTCAAGTTCTGACTAGGCCTAATGAAGGTGAAATCAGAGTGAATTGCAATTATGTCAATCCTGTCTGA 1014 0.4369 MKLHYLSLFLLLIILELSTIYGLSAQANVPKKSLKSLPPEALLSIAHYHRTCPDAEGIISQKVAAWVKKDPTLAPAIIRLHFHDCAIRGCDGSVLLNHSGSERTAFESKTLRGFQLIDDIKAELERRCPRTVSCADILTAAARDATILAGGPFWEVPFGRKDGRISLAKEATLVPKGHENITSLLNFFQERGLDMLDLVTLSGSHTIGRSTCYSFMDRIYNFNGTGKPDPSLNVYYLKLLRKRCKSVLDLVYLDVTTPRTFDTTYYTNLKRKVGLLSTDQSLFSDARTAPFVEAFATQPFLFTSQFAVSMVKLGNVQVLTRPNEGEIRVNCNYVNPV. 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06835 337 FunFam Peroxidase 175 313 - -
Seca4g06835 337 SUPERFAMILY Heme-dependent peroxidases 43 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 Gene3D Peroxidase, domain 2 175 313 - -
Seca4g06835 337 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 PANTHER PEROXIDASE 25-RELATED 15 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Seca4g06835 337 ProSiteProfiles Plant heme peroxidase family profile. 42 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 CDD secretory_peroxidase 43 334 IPR033905 GO:0004601|GO:0042744
Seca4g06835 337 Gene3D - 47 335 - -
Seca4g06835 337 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 FunFam Peroxidase 46 186 - -
Seca4g06835 337 Pfam Peroxidase 60 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06835 337 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06835 Seca-Chr4 143079775 143081578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06835 35 335 Peroxidase AT1G30870 51.974 4.16e-110 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06835 K00430 - gmx:100792775 575.859