Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06832 ATGGCTAAGAAGGCAGTGTTGATAGGATGCAACTACCCAGGAACAAAGGCAGAGCTAAGAGGGTGCATTAACGATGTGTGGAGGATGCACAACTGTCTCATTCACAGATATGGCTTCTTAGAGGAAGATATCATTATCCTCATTGATACAAACAATTCATTCACCCAACCCACTGGCAAAAACATTCGATCTGCCATGTCCACACTAGTCCAGTCGGCCAAGCCTGGCGACGTGCTCTTTGTCCACTATAGTGGCCACGGCACACGCCTCCCCGCAGAGACCCAAGAGGATGACAACACCGGTTATGATGAGTGCATTGTTCCTACTGATATGAATCTCATCACGGACGATGACTTCAGAGGATTTGTGGAGACAGTCCCTAGGGGTTGTTCGATCACGATCGTATCAGACTCTTGTCACAGTGGTGGTCTGATTGAAGCTGCTAACGAGCAAATAGGAGATAGCACAAAGGAAGGTGGCCGAAACTCAAACTCCGGCTTTAAAGTAAAACACTTTCTTCAAAGAACTGTGGAAAATACCATTGAGTCTTGTGACATAGATGTTTCATCGGAATTGTGCCACCATAGATACAAAAATGACATTGAAGAAAGACATGTTGAACTTCATCACGGGAACTACAGTTATGTAAAGAATCGGTCTTTGCCTCTTTCAGCTCTTGTTGACATACTGAAGCATAAAACTGGGAAAGATGATATAGATATAGGTAAACTAAGACCCACCCTATATTATATCTTCGGGGAAGATGCTAGCCCTAAAGTAAAGACGTTCATGAAGTATGTCTTGAACAAACTCCAACATGGTGGAAAAAATAATGGAATTTTGGGACTGGTGGGTACTCTTGCCCAAGAGCTTCTCAAACATAAGTTGAATGAGAATGATGAGGGGTACAAAAATCATGCCATAGAGGCACATACGGGGAGTGAGCAAGATGCATATGCTACATCAACTAAGCGCAACGCTTTAGATTGTGGAATTCTGTTGAGTGGTTGCCAGACTGACCAAACTTCTGCTGATGCAAGTCCTTATGGAAATTCTGACAAAGCTTATGGAGCTTTTAGCAATGCAATACAAACTATAATTGAGGAGACTGATGGCACAGTTACAAACCGAGACCTTGTTCTGAAGGCTAGGAAGAAACTTCAGAGGCAGGGTTTCACTCAGAAACCTGGACTCTATTGCAGTGACGATCATGTTGATGCTCCCTTTGTGTGCTGA 1236 0.4361 MAKKAVLIGCNYPGTKAELRGCINDVWRMHNCLIHRYGFLEEDIIILIDTNNSFTQPTGKNIRSAMSTLVQSAKPGDVLFVHYSGHGTRLPAETQEDDNTGYDECIVPTDMNLITDDDFRGFVETVPRGCSITIVSDSCHSGGLIEAANEQIGDSTKEGGRNSNSGFKVKHFLQRTVENTIESCDIDVSSELCHHRYKNDIEERHVELHHGNYSYVKNRSLPLSALVDILKHKTGKDDIDIGKLRPTLYYIFGEDASPKVKTFMKYVLNKLQHGGKNNGILGLVGTLAQELLKHKLNENDEGYKNHAIEAHTGSEQDAYATSTKRNALDCGILLSGCQTDQTSADASPYGNSDKAYGAFSNAIQTIIEETDGTVTNRDLVLKARKKLQRQGFTQKPGLYCSDDHVDAPFVC. 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06832 411 Gene3D - 292 410 - -
Seca4g06832 411 Gene3D - 1 206 - -
Seca4g06832 411 Pfam Caspase domain 3 403 IPR011600 GO:0004197|GO:0006508
Seca4g06832 411 PANTHER METACASPASE-4 2 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06832 Seca-Chr4 143047505 143050757 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06832 - - gmx:100802658 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06832 4 143047505 143050757 Seca4g06832 4 143047505 143050757 ECH
Seca4g06832 4 143047505 143050757 Seca4g06832 4 143047505 143050757 PCT