Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06805 ATGAAAGTTGGAAATGGCTTCAGTGAAGGTGTGGTTCAGGGCCCTCTGATCAATGAAGCTGCTGTTAAAAAGGTTGAGTCTTTAATTCATGATGCTACATCAAAGGGGGCAAAAGTAATTCTTGGTGGTAAAAGACATAGCCTTGGATTAACTTTTTATGAACCAACGGTCATCAAAGATGTCGACAATGAGATGCTCATATCAAGAGAGGAAGTATTTGGACCTGTCGCACCCCTTTTGAGGTTCAAAACTGAAGAGGATGCTATCAAAATTGCTAACAACACTAACGCAGGTTTGGGTTCATACATATTTACAAACAGTATCCAACGATCATGGCGAGTTGCTGAGGCTCTTGAATATGGACTTGTGGGTGTTAATGAAGGAGTAATTTCAACAGAGGTGGCTCCATTTGGGGGTGTTAAACAGTCTGGCCTAGGAAGAGAAGGCTCCAAATATGGGATGGATGAGTATTTGGAGATCAAGTATGTCTGCTTTGGAAACATGAACAAAGACTGA 516 0.4147 MKVGNGFSEGVVQGPLINEAAVKKVESLIHDATSKGAKVILGGKRHSLGLTFYEPTVIKDVDNEMLISREEVFGPVAPLLRFKTEEDAIKIANNTNAGLGSYIFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCFGNMNKD. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06805 171 Pfam Aldehyde dehydrogenase family 1 163 IPR015590 GO:0016491
Seca4g06805 171 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 134 IPR016163 GO:0016620
Seca4g06805 171 FunFam Aldehyde dehydrogenase, putative 135 161 - -
Seca4g06805 171 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 135 157 IPR016162 GO:0016491
Seca4g06805 171 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 2 168 - -
Seca4g06805 171 SUPERFAMILY ALDH-like 1 169 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06805 Seca-Chr4 141892372 141904555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06805 1 170 Aldehyde Dehydrogenase Gene Family AT1G79440 78.235 2.61e-99 294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06805 4 141892372 141904555 Seca4g06805 4 141892372 141904555 ECH