Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06804 ATGGTGGTTGTAGCAGTGAAGGTTGGCAGCATGAGCATGGCACTGCAATCCTCGAAGCTTCTCTCTCGATCTTCCCGTCTACTCTCCTCTAAGTTGCAGATGCAGATGCCCCTCATTCGCAAGATAAGTGCAGATGCACGTAGTGTTGCTTCCCAGATTAACAGTAAAGGACTGTTGAGGACTCAAGGCCTTATCGGAGGAAAATGGATCGATGCTTATGATGGGAAAACCATAAAGGTTTATAATCCTGCAACTGGTGAGTCTATAGCAGATGTTGCATGCATGGGTGGAAGAGAGACGAATGATGCGATTTCTTCAGCCTCTGATGCATTTAGATCATGGAGCAAAATCACTGCTGCTGAGCGAAGCAAATTTCTGAGGAAATGGTATGATTTGCTAATGGCACATAAAGAAGAGCTAGCACAACTTATAACCTTGGAGCAAGGGAAGCCTCTTACGGAGTCTATGGGTGAGATAAACTATGGGGCTGGCTTCATTGAGTTTGCATCTGAGGAGGCAAAGCGTATATATGGGGATATAATTCCTGCACCTCTATCTGATCGGCGGTTATTTGTTTTAAAGCAGCCTGTAGGGGTTGTAGGTGCAATTACACCTTGGAACTTTCCCCTTGCTATGATTACCCGAAAGGTTGGTCCAGCCCTTGCATGTGGCTGTACAGTGATCATAAAGCCCTCTGAACTTACACCTCTTACTGCTTTAGCTGCAGCAGAACTCTCTATTCAAGCTGGAATACCAGCGGGTGTTGTGAACGTAGTTATGGGAAATGCTCCTGATATTGGGGATACTTTACTTGCAAGTCCACAGGTAAGGAAGATCACATTTACAGGCTCGACAGCTGTTGGAAAGAAATTGATGGCAGGTTCTGCTGGGACAGTTAAAAGATATCTCTGGAACTTGGTGGCAATGCACCATGCATAG 939 0.4558 MVVVAVKVGSMSMALQSSKLLSRSSRLLSSKLQMQMPLIRKISADARSVASQINSKGLLRTQGLIGGKWIDAYDGKTIKVYNPATGESIADVACMGGRETNDAISSASDAFRSWSKITAAERSKFLRKWYDLLMAHKEELAQLITLEQGKPLTESMGEINYGAGFIEFASEEAKRIYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVIIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPDIGDTLLASPQVRKITFTGSTAVGKKLMAGSAGTVKRYLWNLVAMHHA. 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06804 312 SUPERFAMILY ALDH-like 53 306 IPR016161 GO:0016491
Seca4g06804 312 Pfam Aldehyde dehydrogenase family 69 304 IPR015590 GO:0016491
Seca4g06804 312 FunFam Succinate-semialdehyde dehydrogenase I 75 310 - -
Seca4g06804 312 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 52 310 IPR016162 GO:0016491
Seca4g06804 312 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 55 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06804 Seca-Chr4 141880162 141889751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06804 19 301 Aldehyde Dehydrogenase Gene Family AT1G79440 74.205 1.40e-142 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06804 K17761 - gmx:100808318 477.248