Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06803 ATGGCGTCTTCGAGCGCAGCAGGTTCTGGATCTGCTGATTCCACAGCTACAAGAAGAAACACGAAGCGACCCAAGTATTCAAAGTTTACACAGCAAGAACTTCCAGCATGCAAGCCAATTCTTACGCCACGAGCGGTTATTTCAGCATTTTTACTTGTCAGTGTTGTATTTGTTCCTATTGGTGTTGCTTCATTGATCGCTTCAAGGAAGGTTGTTGAAATTGTTCATAGGTATGAATCACAGTGCATACCGAAAAATGTCACAGACAATGTAGCATACATTCAGAGTTCTGCAGATATAACATGCCACATAACACTAAAGGAAAAGGTGGAGAAGCACATGAAATCACCTATTTATGTTTACTATCAGCTTGACAACTTCTACCAGAATCATCGTCGGTATGTTAAAAGCCGAAGTGATGAGCAGTTGAGGGATCGTAGTGAAGAGAACTCGACAAGTGCTTGTAAGCCTGAAGATATTGCCAATAATAGAGCAATTGTACCTTGTGGTCTTATAGCTTGGAGTTTATTCAATGACACATACAGCTTCTCTCGCAACAAGAAGAATTTGACAGTAAACAAGAAAGGCATCTCCTGGAAGAGTGATAGGGAGCACAAATTCGGAAAAGATGTTTTCCCTAAAAACTTCCAGAGTGGTTCTATTATTGGTGGTAAACATCTCAATGAATCCATACCGTTGAGTGAGCAGGAGGATCTTATTGTCTGGATGCGAACTGCTGCCTTGCCAACTTTTAGGAAGTTGTATGGAAAGATAGAGGTGGATCTGGATGAAGGTGATGACATAAGTGTAACACTTCAAAATAACTACAACACATACAGTTTTAATGGCAAGAAAAAGCTCGTACTGTCAACTACTAGCTGGCTTGGTGGGAAGAATGACTTCCTTGGCATTGCTTATCTCACTGTTGGAGGATTGTGCTTCTTTTTGGCTTTGGCTTTTACCATTGTATATTTTGTCAAGCCAAGGCAACTTGGAGACCCCTCATATTTGTCATGGAATAGGAATCCAGGAGGGCACTGA 1041 0.4121 MASSSAAGSGSADSTATRRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSVVFVPIGVASLIASRKVVEIVHRYESQCIPKNVTDNVAYIQSSADITCHITLKEKVEKHMKSPIYVYYQLDNFYQNHRRYVKSRSDEQLRDRSEENSTSACKPEDIANNRAIVPCGLIAWSLFNDTYSFSRNKKNLTVNKKGISWKSDREHKFGKDVFPKNFQSGSIIGGKHLNESIPLSEQEDLIVWMRTAALPTFRKLYGKIEVDLDEGDDISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRNPGGH. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06803 346 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 65 330 IPR005045 GO:0016020
Seca4g06803 346 PANTHER CELL CYCLE CONTROL PROTEIN 50 18 339 IPR005045 GO:0016020
Seca4g06803 346 MobiDBLite consensus disorder prediction 1 28 - -
Seca4g06803 346 MobiDBLite consensus disorder prediction 1 17 - -
Seca4g06803 346 PIRSF Lem3/Cdc50 1 342 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06803 Seca-Chr4 141845624 141850659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06803 K26935 - gmx:100806200 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06803 4 141845624 141850659 Seca4g06803 4 141845624 141850659 ECH
Seca4g06803 4 141845624 141850659 Seca4g06803 4 141845624 141850659 PCT