Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06788 ATGATGAACTTTCAAGCTTGCTTTTTCACCATCTTAAAGTTGTTCTGTTTTTATATCATTCTCCTCCCAACTCTGGCTTCAGGTGATTGCACATGTGACACAGAAGAAGCCAAACAGGGTGATCAAACTGAAACTCTCCATTACAAAATTGGTTCAATTGCTTCTGTTCTTGTTGCTGGTGCTCTTGGGGTGAGCCTTCCCTTGTTGAGTAAGAGAATCCCAGCTTTAAATCCCAAAAATGATATCTTTTTCATGGTTAAAGCTTTTGCAGCAGGGGTAATATTGGCAACAGGGTTTGTCCATATACTACCAGAAGCATTTGAAAGCTTGACTTCACCTTACTTAAAGGAAAATCCATGGGGAAAGTTTCCCTTTACTGGTTTTGTTGCCATGTTGTGTTCAATTGGAACATTGATGTTGGATTCATTTGCCACGGGGTTTTATCAAAGGCAACATTTTAATCCTTCAAAGCAAGTTCCTGCTGCAGATGAAGAAATGGGAGATGAACATGCTGGTCACATACATGTTCATACACATACCACACATGGTCATGCTCATGGGTCAGCTCATTCTTCTGAGGTTTCAATAGCATCTGAACTAATTAGGCAGCGCATCATATCACAAGATTGGTTTCTGTGCCAGGTGTTGGAGATAGGAATAGTGGTCCATTCAGTGATCATTGGAATATCTTTGGGTACTGCTGGTAGCATTGATATCATAAAGCCTCTTCTGGTGGCCTTGTCTTTTCATCAATTTTTTGAGGGGATGGGGCTTGGTGGTTGCATATCTCAGGCAAAGTTTGAGTCCAGGTCCACAGCAATTATGGCTACCTTTTTCTCACTAACAACCCCAATTGGGATAGCAATTGGGATGGGAGTATCAAGTGTGTACAGAGATAATAGCCCAACTGCTCTAATTGTTGAAGGGGTTTTCAATTCTGCTTCAGCTGGAATTTTGATTTACATGGCATTAGTTGATCTTCTAGCAGCAGATTTTATGAGCCCCAAGTTGCAGAACAATTTGAAGCTACAATTAGGAGCAAATATCTCTCTTCTTTTAGGTGCAGGTTGCATGTCTCTATTGGCCAAATGGGCTTAA 1098 0.4098 MMNFQACFFTILKLFCFYIILLPTLASGDCTCDTEEAKQGDQTETLHYKIGSIASVLVAGALGVSLPLLSKRIPALNPKNDIFFMVKAFAAGVILATGFVHILPEAFESLTSPYLKENPWGKFPFTGFVAMLCSIGTLMLDSFATGFYQRQHFNPSKQVPAADEEMGDEHAGHIHVHTHTTHGHAHGSAHSSEVSIASELIRQRIISQDWFLCQVLEIGIVVHSVIIGISLGTAGSIDIIKPLLVALSFHQFFEGMGLGGCISQAKFESRSTAIMATFFSLTTPIGIAIGMGVSSVYRDNSPTALIVEGVFNSASAGILIYMALVDLLAADFMSPKLQNNLKLQLGANISLLLGAGCMSLLAKWA. 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06788 365 Pfam ZIP Zinc transporter 47 362 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca4g06788 365 NCBIfam ZIP zinc/iron transport family 32 365 IPR004698 GO:0005385|GO:0016020|GO:0071577
Seca4g06788 365 PANTHER ZINC/IRON TRANSPORTER 46 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06788 Seca-Chr4 141412104 141414272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06788 2 365 Inorganic Solute Cotransporters AT3G12750 61.290 5.58e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06788 K14709 - gmx:100805124 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06788 4 141412104 141414272 Seca4g06788 4 141412104 141414272 ECH