Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06786 ATGGCTTTTCTTCTGCCCAATCTCCAACCTTCTCTCTTAGCCCAATCCAAATCCAAAGACAAACCCCTTCACCAAACTCTTTCACCACCAAAACCCACTTCTCAGTTTCCTTTATCTTCCATCTCTTCTTCTCCCTTGGCCACCCTCCAAACTCCTACTGCACAGGTTGCACAGGTTAACACACCACCAGGTGTTGAAGATAAGCAGCAAAACCAACAGCCAAAGGATGAATTCTATCTCAACCTTGGCCTTGCTGTGAGGACCCTCCGTGAGGACCTACCATTGATCTTCATCAAAGACCTCAATTATGACATTTACAGAGATGATATAACATTCATGGACCCCTTGAACACATTTACTGGGATTGAAATGTACAAATTGATCTTCTGGGCATTGAGGTTCCATGGCAAACTCTTGTTTCGTGAGATTGCACTTGATATATACAGGGTGTGGCAGCCTTCAGAGAATGTGATATTGATAAGGTGGAACCTTAAGGGTGTGCCACGCGTTCCTTGGGAGGCTAAAGGAGAGTTTCAGGGTACTTCAAGGTATAAATTGGATAGAAATGGCAAGATTTATGAACACAAAGTTGATAACTTGGCATTCAATTTTCCACAGAATATCAAACCAGTTTCAGTTTTGGATTTGGTTACTGCATGCCCTGCAAGTCCGAATCCTACATTTTTGTGGGGTCCTGTGGATGTCTACTCTAATTCATGGATAGCTTTATACAAGGCAGTTAGGGAGACATTGGATCAGGAAGGGAGTTTGCTACCACAAGATGGTCTAGCTACATGTTCATAG 804 0.4316 MAFLLPNLQPSLLAQSKSKDKPLHQTLSPPKPTSQFPLSSISSSPLATLQTPTAQVAQVNTPPGVEDKQQNQQPKDEFYLNLGLAVRTLREDLPLIFIKDLNYDIYRDDITFMDPLNTFTGIEMYKLIFWALRFHGKLLFREIALDIYRVWQPSENVILIRWNLKGVPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQNIKPVSVLDLVTACPASPNPTFLWGPVDVYSNSWIALYKAVRETLDQEGSLLPQDGLATCS. 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06786 267 MobiDBLite consensus disorder prediction 1 42 - -
Seca4g06786 267 MobiDBLite consensus disorder prediction 9 42 - -
Seca4g06786 267 PANTHER RIKEN CDNA 2310061I04 GENE 23 233 IPR018790 -
Seca4g06786 267 SUPERFAMILY NTF2-like 102 196 IPR032710 -
Seca4g06786 267 Pfam Uncharacterized conserved protein (DUF2358) 85 195 IPR018790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06786 Seca-Chr4 141348079 141349556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06786 - - gmx:100795419 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06786 4 141348079 141349556 Seca4g06786 4 141348079 141349556 ECH
Seca4g06786 4 141348079 141349556 Seca4g06786 4 141348079 141349556 PCT