Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06782 ATGCACAAACTGGGGAGGGGTCATCGTGATAAACTCCAGCAGTTCATAACAATAACTGGAGCTAGTGAGAAAGTAGCACTGCAGGCTCTGAAGGCTAGTGATTGGCATCTTGAAGGAGCATTTGATTTTTTTTACAGCCAGCCCCAACTTAAAGCATTTACTGATTCTAGACACTTGGAGGAGCTATACAATAGATATAAAGATCAATATGTTGATATGATTTTGGCAGATGGTATCACTCTCCTTTGCAATGATATCCAGGTGGATCCTCAAGATATAGTAATGTTAGTTCTTTCATGGCACATGAAGGCTGGCACCATGTGTGAATTTTCCAAGAAGGAGTTCATTGAAGGCTTACAATCTCTAGGGATTGATTCGCTGGAGAAGTTCCGTGAAAAGATACCTTATATGCGATCTGAGTTGAAAGATGAACAGAAGTTCCGTGAGATATATAACTTTGCTTTTGGCTGGGCAAAAGAAAAGGGTCAAAAATCTCTGGCATTGGATACAGCTATTGGAATGTGGCAATTACTATTTGCCGAGAAGCAGTGGCCACTAGTTGATCACTGGTGCCAGTTCTTGCAGGTAATAATGTTAATTACACACCATTCTAGCTTTCACTGA 624 0.4071 MHKLGRGHRDKLQQFITITGASEKVALQALKASDWHLEGAFDFFYSQPQLKAFTDSRHLEELYNRYKDQYVDMILADGITLLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQSLGIDSLEKFREKIPYMRSELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQVIMLITHHSSFH. 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06782 207 Pfam UBA-like domain 9 47 - -
Seca4g06782 207 Pfam Cullin binding 130 195 IPR005176 -
Seca4g06782 207 ProSiteProfiles DCUN1 domain profile. 54 207 IPR005176 -
Seca4g06782 207 PANTHER RP42 RELATED 22 195 IPR014764 -
Seca4g06782 207 CDD UBA_DCNL 8 48 - -
Seca4g06782 207 Gene3D Cullin, PONY binding domain 143 202 IPR042460 -
Seca4g06782 207 FunFam Defective in cullin neddylation protein 53 142 - -
Seca4g06782 207 Gene3D - 53 142 - -
Seca4g06782 207 FunFam Defective in cullin neddylation protein 6 47 - -
Seca4g06782 207 SUPERFAMILY UBA-like 7 46 IPR009060 GO:0005515
Seca4g06782 207 Gene3D - 6 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06782 Seca-Chr4 141138306 141146294 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06782 K17822 - gmx:100795410 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06782 4 141138306 141146294 Seca4g06782 4 141138306 141146294 ECH