Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06734 ATGGTTGGGAAAGGTGAGGGTCCGGCGATAGGAATCGATTTGAGGATGACTTACTCTCGCTTTGGTGTTTGGCAGCACAATTGTGATGAAATCATCGTCAACGATCAGGATAACAAAACCACTCCATCCTATGTGGCTTTCACTGACACAGAACGCTTGATCGGCGATGCAACCAAGAACCAGGCCGCTATATACCTAACCAACATTGTTTTTTATGGTAAGCGTTTGATCGAAAGGCGTTTCAACGATTCTTTCAGCGATTCTTCAGTACAGAGTGACATGAAATTGTGA 291 0.4433 MVGKGEGPAIGIDLRMTYSRFGVWQHNCDEIIVNDQDNKTTPSYVAFTDTERLIGDATKNQAAIYLTNIVFYGKRLIERRFNDSFSDSSVQSDMKL. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06734 96 PANTHER HEAT SHOCK PROTEIN 70KDA 9 95 IPR013126 GO:0005524|GO:0140662
Seca4g06734 96 Gene3D - 3 96 - -
Seca4g06734 96 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca4g06734 96 PRINTS 70kDa heat shock protein signature 36 48 - -
Seca4g06734 96 PRINTS 70kDa heat shock protein signature 58 66 - -
Seca4g06734 96 Pfam Hsp70 protein 9 89 IPR013126 GO:0005524|GO:0140662
Seca4g06734 96 SUPERFAMILY Actin-like ATPase domain 8 84 IPR043129 -
Seca4g06734 96 FunFam heat shock 70 kDa protein-like 3 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06734 Seca-Chr4 138829291 138829581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06734 1 96 Calmodulin-binding Proteins AT5G02500 72.917 8.66e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06734 K03283 - ppp:112279602 132.88