Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06722 ATGAACCCCAAGATTTCTGATTTTGGTATGGCAAGAATTTTCATGCAAGAATCAGAGGAAAAAACCACTAGAATTGTTGGTACATATGGCTACATGCCGCCAGAGTATGCCATGAATGGTGTTTTCTCAAGAAAGTCAGATGTCTATAGTTTTGGAGTATTAATGCTTGAGATTGTGAGTGGTAGAAGAAATAACAGCTTCAAGAATGCCTCTTGTCCAGTTAGTGGAACATATCAAGTTTTGAGATGCATTCATGTTGGTCTACTTTGTGTTGAAGAATGCTCAGTTGATCGACCAACTATGTTAGAGATTTTATCAATGTTAACAAATGTCAATGAAATACTTCCTTTACATAAGAGACCAGCATTTTGTTACTTTGGTGGAAGGATCAATGAAGTAAAGAAATCTCCTAAGCATCTGAATTATGATTCAATAAATGACATGATCATCTCTGATATTTCTGCAAGATAG 471 0.3546 MNPKISDFGMARIFMQESEEKTTRIVGTYGYMPPEYAMNGVFSRKSDVYSFGVLMLEIVSGRRNNSFKNASCPVSGTYQVLRCIHVGLLCVEECSVDRPTMLEILSMLTNVNEILPLHKRPAFCYFGGRINEVKKSPKHLNYDSINDMIISDISAR. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06722 156 ProSiteProfiles Protein kinase domain profile. 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g06722 156 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 134 - -
Seca4g06722 156 SUPERFAMILY Protein kinase-like (PK-like) 1 128 IPR011009 -
Seca4g06722 156 Gene3D Transferase(Phosphotransferase) domain 1 1 119 - -
Seca4g06722 156 Pfam Protein tyrosine and serine/threonine kinase 4 62 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06722 Seca-Chr4 138179872 138185131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06722 1 156 Receptor kinase-like Gene Family AT4G23150 44.385 1.30e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca4g06722 PK_Tyr_Ser-Thr 7.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06722 - - qsu:112006010 165.622