Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06696 ATGCGGAGCTGCTTCAACGCATGGATAGTGGTTGCACTAGTAGTAGTCCCTGTGCTTCTCTCTCTCAGGAACCCACGAGGGGAAACTGAGAACACTGAAACTACTACTTCTTTCTCTGACTCTTCCTTTTCGGTGAAGCTCGCCAATACATTACCCTTCAACCAGAGGATTCGAGATGGCTCCAATCTCGAATATGACTTTTATAGGGACAGTTGCCCTCAGGCAGAGGACATTGTCCGTTCTGCTGTCACTCGCATCTACTTCGATCAAAGGGATGTCTCCCCTGCTCTCCTCCGTCTCTTCTTCCATGACTGCTTCATCCAGGGCTGTGATGCTTCATTGCTGTTGGATGACAATGGTGATAGAAACCGTTCCGTTGAGAAGCAGGCTGTTCCAAATCAGACCTTGAAAGGTTTTGACAAAATTGACTTGATTAAGGAGGAGGTGGAACAAGCATGTCCTGGGGTTGTATCTTGTGCTGACATACTTGCTCTTGCTGCAAGAGATTCCATTCTCTTGGCTGGTGGGCCTTTCTATCCAGTTTTAACAGGCAGACGGGACAGCCAACAATCATTTTTCAAGGAAGCAACTGATCAGATTCCCAGACCTGATGATAACATTAGACGCACACTGCATCTCTTCAATCTCAGAGGATTTAATGAAAGAGAAACAGTTAGCCTTCTTGGAGCACACAACATTGGAAAAATTGGTTGTGATTTCATTCAGCAAAGGCTGTACAACTTTCAGGGCACAGGGCAGCCAGACCCTAGTATACCTCCTGATTTCCTTCGTCAAATGAGGCTAAACTGCCAAGATAATAAGAATGTAAGCAGTGATGAGTTTTCCACGTCTGTGATTTCAGAGCCAGAGAGTGTTGTTGTTCACTCTGATCCAGGGATGTCATACATGCAAGCATTATCATCTTCAGTATCTTCTGGAGCAGGATTTGACACTCACTATTACCAGAGCTTGTTAAGAGGAAGAGGGCTACTTTTTGCTGATCAGCAGCTCATGGCTGAGGAGAAGACTGCTAGATTGGTTTCTGCTTATGCTTCTGATGATGGATCAACATTTCGCATGGATTTTGCTAGGGTCATGTTGAAAATGTCTAATCTTGATGTTTTAACTGGACCTCAAGGTGAGGTTCGTCTGAATTGCTCCCAACCTACAAGTTCTTAA 1179 0.4495 MRSCFNAWIVVALVVVPVLLSLRNPRGETENTETTTSFSDSSFSVKLANTLPFNQRIRDGSNLEYDFYRDSCPQAEDIVRSAVTRIYFDQRDVSPALLRLFFHDCFIQGCDASLLLDDNGDRNRSVEKQAVPNQTLKGFDKIDLIKEEVEQACPGVVSCADILALAARDSILLAGGPFYPVLTGRRDSQQSFFKEATDQIPRPDDNIRRTLHLFNLRGFNERETVSLLGAHNIGKIGCDFIQQRLYNFQGTGQPDPSIPPDFLRQMRLNCQDNKNVSSDEFSTSVISEPESVVVHSDPGMSYMQALSSSVSSGAGFDTHYYQSLLRGRGLLFADQQLMAEEKTARLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGPQGEVRLNCSQPTSS. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06696 392 Gene3D - 67 387 - -
Seca4g06696 392 ProSiteProfiles Plant heme peroxidase family profile. 62 390 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PRINTS Plant peroxidase signature 96 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PRINTS Plant peroxidase signature 222 234 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PRINTS Plant peroxidase signature 156 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PRINTS Plant peroxidase signature 175 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PRINTS Plant peroxidase signature 307 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PRINTS Plant peroxidase signature 364 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PRINTS Plant peroxidase signature 137 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PRINTS Plant peroxidase signature 323 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PRINTS Plant peroxidase signature 72 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 FunFam Peroxidase 201 370 - -
Seca4g06696 392 Pfam Peroxidase 79 353 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 Gene3D Peroxidase, domain 2 201 370 - -
Seca4g06696 392 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PRINTS Haem peroxidase superfamily signature 94 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PRINTS Haem peroxidase superfamily signature 309 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PRINTS Haem peroxidase superfamily signature 157 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PRINTS Haem peroxidase superfamily signature 175 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 FunFam Peroxidase 66 212 - -
Seca4g06696 392 SUPERFAMILY Heme-dependent peroxidases 63 388 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 PANTHER PEROXIDASE 25-RELATED 22 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca4g06696 392 CDD secretory_peroxidase 62 387 IPR033905 GO:0004601|GO:0042744
Seca4g06696 392 ProSitePatterns Peroxidases active site signature. 94 105 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06696 Seca-Chr4 137822860 137825876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06696 45 388 Peroxidase AT4G33870 45.429 5.83e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06696 K00430 - gmx:100804973 627.861