Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06691 ATGAAACAGTTGATTCGCCGGCTCTCGCGAGTGGCGGACTCCTCGCAGTACACTCTCCTCCGGTCCGACTCACAGTGCCGCCGGCGACGAGTTGAGTCGTTCCGGCTGTCCGCGGCGGCGAAGATCCGGCGCTCATCGGCGGTGGTGCCGGAGGGACACGTGCCGATCTACGTCGGCGATGAGATGGAGCGGTTCGTGGTGTGCGCGGAGCTTCTGAACCACCCGGTCTTCGTGAAGCTTTTGAACCAATCGGCACAAGAATACGGTTACGAGCAGAAAGGAGTGCTTCGATTGCCATGCCATGTCTTCGTCTTCGAGCGCGTTCTTGAAGCGCTCCAACTCGGACTCGACACGCGCCACATCACGGAACTCCTCAGTTCCTCTTCAGAAGAATTCTCCTAG 402 0.5945 MKQLIRRLSRVADSSQYTLLRSDSQCRRRRVESFRLSAAAKIRRSSAVVPEGHVPIYVGDEMERFVVCAELLNHPVFVKLLNQSAQEYGYEQKGVLRLPCHVFVFERVLEALQLGLDTRHITELLSSSSEEFS. 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06691 133 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 108 IPR003676 GO:0009733
Seca4g06691 133 Pfam Auxin responsive protein 7 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06691 Seca-Chr4 137418353 137418754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06691 45 131 Calmodulin-binding Proteins AT4G31320 33.333 4.67e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06691 K14488 - gmx:100793103 208.764