Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g06630 | ATGCGTCTTGGGACCCCTTCCTCCCTCTCCCGTATTCTATTCCCCACGTTAAGGACGGAATGTACTGTTTCTGCTGCGGGTTCTATTCCCCACCCAAGTAGCACACGATTTATTGCTTATGAAGAACTTAAAGAAGCAGCAAACAATTTTGAACCAGCGAGTGTACTTGGAGAAGGAGGGTTTGGTAGAGTTTTTAAAGGTGTCTTAAATGATGGTACTTCTATAGCAATTAAGAGGCTTACAAGTGGAGGGCAACAAGGTGACAAAGAGTTTCTGGTTGAGGTTGAAATGCTTAGCCGATTGCATCACCGTAACCTTGTAAAACTGGTGGGATACTATAGTAGTCATGACTCATCACAAAATCTACTTTGCTATGAGCTTGTCCCTAATGGAAGTTTGGAAGCTTGGCTTCATGGAATAAATTGTCCTTTGGATTGGGACACCAGAATAAAAATTGCTCTTGATGCTGCAAGAGGACTTTCATACCTGCATGAAGACTCACAGCCCTGTGTAATACACAGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAATTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAGGCACCTGAAGGCAGATCTAATTATTTGTCTACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACTGGGCACCTACTTGTTAAAAGTGATGTTTATAGCTATGGGGTTGTCTTTTGCAAGAACTACTTACTGGAAGGAAATATGTCACAGCCAAGTGCACAAGAGAACCTTGTTACTTGGGTTAGTTCTGTAGCTAGGCCAATCCTGAGAGACAAGGACCGGCTGGAAGAGATTGTTGATCCCAAACTTGGGGGAAAGTATCCAAAGGAAGATTTTGTTCGTGTGTGCACTATTGCTGCAGCTTGTGTTGCTCCTGAAGCAAGCCAACGACCCACAATGGGTGAAGTGGTACAATCACTTAAAATGGTGCAGCGCATCACAGAATATCAAGATTCTATGTTAGCCTCATCCAATACATGGCTAAACATGAGACAGTCCTCTAGCACTTTTGAGTTTGACGGAACATCTTCAATGTTCTCCTCATGTCCTTACTCTAGTCTAAGTGATGCCTTTGACAATGAGAACATTTATAGGACGGTGGTTTTCTCTGAAGATCTTCATGAAGGACGATGA | 1185 | 0.4295 | MRLGTPSSLSRILFPTLRTECTVSAAGSIPHPSSTRFIAYEELKEAANNFEPASVLGEGGFGRVFKGVLNDGTSIAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSSHDSSQNLLCYELVPNGSLEAWLHGINCPLDWDTRIKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVFCKNYLLEGNMSQPSAQENLVTWVSSVARPILRDKDRLEEIVDPKLGGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITEYQDSMLASSNTWLNMRQSSSTFEFDGTSSMFSSCPYSSLSDAFDNENIYRTVVFSEDLHEGR. | 395 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g06630 | 394 | CDD | STKc_IRAK | 56 | 325 | - | - | |
Seca4g06630 | 394 | PANTHER | OS01G0750732 PROTEIN | 31 | 340 | - | - | |
Seca4g06630 | 394 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 128 | 343 | - | - | |
Seca4g06630 | 394 | ProSitePatterns | Protein kinases ATP-binding region signature. | 56 | 78 | IPR017441 | GO:0005524 | |
Seca4g06630 | 394 | ProSiteProfiles | Protein kinase domain profile. | 50 | 327 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g06630 | 394 | Gene3D | Phosphorylase Kinase; domain 1 | 32 | 127 | - | - | |
Seca4g06630 | 394 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 171 | 183 | IPR008271 | GO:0004672|GO:0006468 | |
Seca4g06630 | 394 | Pfam | Protein tyrosine and serine/threonine kinase | 54 | 324 | IPR001245 | GO:0004672|GO:0006468 | |
Seca4g06630 | 394 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 30 | 127 | - | - | |
Seca4g06630 | 394 | SUPERFAMILY | Protein kinase-like (PK-like) | 29 | 326 | IPR011009 | - | |
Seca4g06630 | 394 | Gene3D | Transferase(Phosphotransferase) domain 1 | 128 | 347 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g06630 | Seca-Chr4 | 135190907 | 135192443 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g06630 | 24 | 394 | Receptor kinase-like Gene Family | AT4G02010 | 79.420 | 0.0 | 613 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_Extensin | Seca4g06630 | PK_Tyr_Ser-Thr | 1e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g06630 | - | - | adu:107492376 | 652.129 |