Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06620 ATGAACAATTCTCATCCTGGTGTTCAGAGAAGCTCCCACCCAGATTCAGACATACTAAGAAGCAGTAATTTCTTTTTATCCTCCACTACAGTTGGATTTAAATTCTTCAGGCAATCTCCCTTTACATTTTCACTATTCCCATGCCATACCGTTATTGCATTTGATCCAGAATGGAAAAGCAGCAATTGGATCTATGAATGTTGTGCCCTCTTTGGTGGAATTAATCAGGAACGGATCGGATCTCCTAGAAACAAAGAGAATGCAACTTCGGTGTTAGTGCACCTCTGCAGTGGAAATCCACTACATCTATCAGTTGTCAGTTCACTTAGGGTGATCAATCCTCTCTTGGACCTGGCAAAAAATGGTTCTGAAAGGGGCAAGCGGAAAGCTGCTGAGCTTCTTGAGTTGATATATAGGCATTTATAG 426 0.4155 MNNSHPGVQRSSHPDSDILRSSNFFLSSTTVGFKFFRQSPFTFSLFPCHTVIAFDPEWKSSNWIYECCALFGGINQERIGSPRNKENATSVLVHLCSGNPLHLSVVSSLRVINPLLDLAKNGSERGKRKAAELLELIYRHL. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06620 141 Gene3D - 67 140 IPR011989 -
Seca4g06620 141 SUPERFAMILY ARM repeat 81 135 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06620 Seca-Chr4 134959628 134960373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06620 78 139 U-box Gene Family AT3G46510 64.516 7.20e-22 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06620 - - pvu:PHAVU_008G099500g 94.7449