Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06617 ATGAAAAGTAAAAGGTTTCTATACAATAAAAATGGTAATAGTGACATTGCTAACATTTGTTTTAAAGCGTTTGGGAGAGAATTTCTGATTTTGTCAATTTCTCTTTTCAGAGATGTCATATTGGAAGCTAAATCAAATAAACTCATTGGGTGGACATGCAATATTTGTTCTCACTCAGTGCCACATTTGCATGTTCACAAAGTGATATTGCAATCTGGCTGTGATTATTTACGAGGATTGTTCCGATCAGGAATGCAAGAGAGTCATTCACAAGTTATAAAGGTTCCTATTAGCTGGGAAGCATTGATGAAACTAGTACTGTGGTTATATTCTGATGAGCTGCCAAAACCTCCCTCTGGATGTTTGTGGGATAATATGGATGATGAAGAAAAGCTATTCAATCTGCAACCATATGTGGAGCTTTGTTGGCTTGCTGAGTTCTGGATTTGGGAAAATATTCAGGAAGCCTGCTGGAATGTGATTATGTCTTGTCTTGATTCTTCTAAGCAGTTGTCCATTAAAATAATAAAAATGGCTCATGAGCTCTCTTTGTGGAAGTTGGTTGACATTGCCGCAAATCTCATAGCTCCTTCATATAGGCAATTACTAGATTCTGGTGAACTTGAAGAATTTGATGATGCACTAGTTCACTTAATTTGTTGTGCTTCTATTCGACTTAACCAAGAAGGTGAAAATAGCTTTAGGTGA 708 0.3658 MKSKRFLYNKNGNSDIANICFKAFGREFLILSISLFRDVILEAKSNKLIGWTCNICSHSVPHLHVHKVILQSGCDYLRGLFRSGMQESHSQVIKVPISWEALMKLVLWLYSDELPKPPSGCLWDNMDDEEKLFNLQPYVELCWLAEFWIWENIQEACWNVIMSCLDSSKQLSIKIIKMAHELSLWKLVDIAANLIAPSYRQLLDSGELEEFDDALVHLICCASIRLNQEGENSFR. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06617 235 PANTHER OS06G0674800 PROTEIN 36 230 IPR044953 -
Seca4g06617 235 SUPERFAMILY POZ domain 62 162 IPR011333 -
Seca4g06617 235 Pfam BTB/POZ domain 62 127 IPR000210 GO:0005515
Seca4g06617 235 ProSiteProfiles BTB domain profile. 37 118 IPR000210 GO:0005515
Seca4g06617 235 CDD BTB_POZ_ZBTB_KLHL-like 62 119 - -
Seca4g06617 235 Gene3D Potassium Channel Kv1.1; Chain A 30 206 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06617 Seca-Chr4 134883851 134890306 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Seca4g06617 BTB 5.4e-07 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06617 - - mtr:25487018 352.058