Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06573 ATGGCGGATGAGGTGGTTCTGTTGGATACCTTGGTCAGCATGTTTGGGATGAGGGTTAGGATCGCATTAGCTGAAAAGGGGGTAAAGTATGAGTACAAAGAAGAGAATCTCAGAAACAAGAGCCCATTGCTTTTACAGATGAACCCAGTTCACAAGAAGATCCCAGTTCTCATCCATAACGGAAAACCCATATGTGAATCTGCAATTATTGTGCAGTACATAGATGAAGTGTATGTTATTTGGAGGAAAATGTGGCTTTCTAAAGGAGAAGAGCATGAGGCAGGGAAGAAGGAGTTGATCTCTATCTTTAAGCAACTAGAGGAGACACTTGGTGACAAACCTTTCTATGGGGGTGACACATTTGGGTTTCTTGATCTTAGTTTGATCCCTTTTTATAGCTGGTTTTATACTTTTGAGACCTTTGGAAACTTCAAAATGGAATCTGAGTGTCCTAAATTGATGGCTTGGGTCAAGAGATGCATGCAGAAAGAGACTGTGTCCAAAACTCTTCCTGATGAGAAGAAGGTGTATGAGTACATTTTGGGTGTGCAGAAAGCACTTGGACTGTAA 570 0.414 MADEVVLLDTLVSMFGMRVRIALAEKGVKYEYKEENLRNKSPLLLQMNPVHKKIPVLIHNGKPICESAIIVQYIDEVYVIWRKMWLSKGEEHEAGKKELISIFKQLEETLGDKPFYGGDTFGFLDLSLIPFYSWFYTFETFGNFKMESECPKLMAWVKRCMQKETVSKTLPDEKKVYEYILGVQKALGL. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06573 189 SUPERFAMILY Thioredoxin-like 4 78 IPR036249 -
Seca4g06573 189 Gene3D Glutaredoxin 1 73 - -
Seca4g06573 189 SUPERFAMILY GST C-terminal domain-like 75 184 IPR036282 -
Seca4g06573 189 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 178 IPR045073 -
Seca4g06573 189 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 60 189 IPR010987 -
Seca4g06573 189 Pfam Glutathione S-transferase, C-terminal domain 93 159 - -
Seca4g06573 189 Gene3D - 74 189 - -
Seca4g06573 189 Pfam Glutathione S-transferase, N-terminal domain 9 76 IPR004045 -
Seca4g06573 189 CDD GST_C_Tau 72 182 IPR045074 GO:0004364|GO:0006749
Seca4g06573 189 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Seca4g06573 189 CDD GST_N_Tau 5 78 - -
Seca4g06573 189 FunFam Tau class glutathione S-transferase 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06573 Seca-Chr4 133879518 133880490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06573 1 185 Glutathione S-transferase Gene Family AT1G78380 56.542 1.09e-84 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06573 K00799 - gmx:547950 323.553