Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06570 ATGTTTGGGATGAGGGCTAAGATGGCTTTGGCTAAGAAAGGTATCAAATATGAGTATTTGGACCGAGATCTTACCAACAGGAGCACCTTGCTTCAAGAAATGAACCTAGTTCACCAGAAGATCCCAATTCTCATACATCATGGGAAACCTATATGTGAATCCATCATAAATTTTTAG 177 0.3898 MFGMRAKMALAKKGIKYEYLDRDLTNRSTLLQEMNLVHQKIPILIHHGKPICESIINF. 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06570 58 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 56 IPR045073 -
Seca4g06570 58 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 58 IPR004045 -
Seca4g06570 58 SUPERFAMILY Thioredoxin-like 2 55 IPR036249 -
Seca4g06570 58 Gene3D Glutaredoxin 1 58 - -
Seca4g06570 58 Pfam Glutathione S-transferase, N-terminal domain 2 56 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06570 Seca-Chr4 133859845 133860021 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06570 1 58 Glutathione S-transferase Gene Family AT1G17190 63.793 3.89e-23 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06570 K00799 - gmx:548030 96.2857