Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06568 ATGGTGGATAAGGCCAATGTCATGTTGTTGGGTTCAGGGTTCAGTATGTTTGGGATGAGGGCTAAGATAGCTTTGGCTGAGAAAGGTATCAAATATGAGAATTTGGAGCAGGATCTTACCAACAAGAGCCCCTTGCTTCAAGAAATGAACCCAATTCACCAGAAGATCCCAGTTCTCATACATCATGGGAAACCCATCTGTGAATCCCTCATAATTGTTGAGTATATTGATATTGTTTGGAACAACAGTGCTCAATTGCTTCCCTCTGATCCCTATCACAGAGCTCAAGCCAGATTCTGGGCTGATTTTGTAGATCAGAAGCAGGTATATCATGTTTCTAGGAGGATATGGACTTCAGAGGGAGATGAGCAAGAGGTAGCAAAGAGGGGCTTCTTAGAGAGCTTAAAGCAATTGGAGGAGGTTCTTGGAGACAACCCTTATTTTGGGGGTGACACTTTTGGGTTTGTTGATGTTGCTTTCATCCCTTTCTATTGCTGGTTTTATACTTATGAGACATTTGGCAACTTCAAAGTGGAGGCAGAGTGTCCAAAACTTATCTCATGGGTTAAGAGATGCATGCAGAAGGAAAGCGTATCTAAAACTCTTGCAGATGGGAAGGAAGTTTATGAGTCTGTTTTGGAATACAAGAAAAAATGTATGTTGGTCTGA 669 0.4185 MVDKANVMLLGSGFSMFGMRAKIALAEKGIKYENLEQDLTNKSPLLQEMNPIHQKIPVLIHHGKPICESLIIVEYIDIVWNNSAQLLPSDPYHRAQARFWADFVDQKQVYHVSRRIWTSEGDEQEVAKRGFLESLKQLEEVLGDNPYFGGDTFGFVDVAFIPFYCWFYTYETFGNFKVEAECPKLISWVKRCMQKESVSKTLADGKEVYESVLEYKKKCMLV. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06568 222 FunFam Glutathione S-transferase U20 90 221 - -
Seca4g06568 222 FunFam Tau class glutathione S-transferase 1 89 - -
Seca4g06568 222 SUPERFAMILY Thioredoxin-like 7 107 IPR036249 -
Seca4g06568 222 SUPERFAMILY GST C-terminal domain-like 80 218 IPR036282 -
Seca4g06568 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 207 IPR045073 -
Seca4g06568 222 Gene3D Glutaredoxin 3 89 - -
Seca4g06568 222 Gene3D - 90 221 - -
Seca4g06568 222 Pfam Glutathione S-transferase, N-terminal domain 10 77 IPR004045 -
Seca4g06568 222 Pfam Glutathione S-transferase, C-terminal domain 119 195 IPR004046 -
Seca4g06568 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Seca4g06568 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 215 IPR010987 -
Seca4g06568 222 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Seca4g06568 222 SFLD Glutathione Transferase (cytosolic) 4 219 IPR040079 -
Seca4g06568 222 SFLD Main.3: Omega- and Tau-like 4 219 IPR045073 -
Seca4g06568 222 CDD GST_N_Tau 7 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06568 Seca-Chr4 133822648 133824084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06568 7 218 Glutathione S-transferase Gene Family AT1G78380 59.906 2.71e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06568 K00799 - gmx:548030 373.244