Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06555 TCATACATAATTTATGTGGCATCTTCTGCTGGTCCAAAGTCCAGTGCCAATCAACTGTTTGTAGAATTGCCTCGGAGGGAAAAGGGCAAAAGGCCATTTGAAAAGGAAAAAAATAGAGGTACGAGGAAGAGGAACGTAGGCTGTTGTATTGTTATGGCAAATAGGAGCACCAGCTTAGTGCTTCCTCACGGGTCAATGTTGCCACATGAACCAGTGGCTCCTCTACCGAGACCTGTGAGGCTATCTGCAAGCTTTCATTCGTTTTCCGCAACATTGGCTGTAACCAATAGAGCCCTCCATGTCTCCCTAGGAAGTTGGGGCTGTGGAGCTTCTTCTTCTTGTTGCTGCTTCCGATTCAAGAGACGCAGCTGCAAGTGGAAACGGCTTGTAAGAAGCTGCTCCACCAGTGAGTTTGTTATTGCTAGTGATGAAAACTATGGCAATAAACAGGTTGTTAGTCTCACTCCACGCCTGTATGATTATGTCCTAAAAAATGTTCGAGAACCAGAGATTCTAAAGCGACTTCGAGAGGAGACTGCTTCTATGCGTGGAAGTCAGATGCAGGTGTCTCCTGATCAGGCACAACTGCTTGCAATGCTTGTACAGATTCTTGGAGCAGAACGGTGTATTGAAGTTGGTGTTTATACTGGTTACTCGTCATTAGCCATAGCATTAGTCCTGCCAGAATCAGGTCATTTAGTTGCCTGTGAAAGAGATGCCAAATCTCTTGATGTTGCCAAGAAGTATTATCAGTTAGCTGGTGTTTCACACAAGGTGGATGTAAAACTTGGACTTGCAGCAGATTCCCTAGAATCTCTAATTCTGAATGGAGAAACAGGAAGCTATGATTTTGCATTTATTGATGCTGAGAAAAGGATGACTGAGAAATATTTTGAACAGCTACTACAACTGGTGAGGGTTGGAGGTCTTATTGTAATTGATAATGTCCTTTGGCATGGAAAAGTTGCTGATCCAATGGTACCTATAGGAGACGGGATGACAATCTGCCGTAAAAGATGA 1020 0.4382 SYIIYVASSAGPKSSANQLFVELPRREKGKRPFEKEKNRGTRKRNVGCCIVMANRSTSLVLPHGSMLPHEPVAPLPRPVRLSASFHSFSATLAVTNRALHVSLGSWGCGASSSCCCFRFKRRSCKWKRLVRSCSTSEFVIASDENYGNKQVVSLTPRLYDYVLKNVREPEILKRLREETASMRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGHLVACERDAKSLDVAKKYYQLAGVSHKVDVKLGLAADSLESLILNGETGSYDFAFIDAEKRMTEKYFEQLLQLVRVGGLIVIDNVLWHGKVADPMVPIGDGMTICRKR. 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06555 339 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 163 339 IPR029063 -
Seca4g06555 339 PANTHER O-METHYLTRANSFERASE-RELATED 148 325 - -
Seca4g06555 339 CDD AdoMet_MTases 208 313 - -
Seca4g06555 339 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 148 339 IPR002935 GO:0008171
Seca4g06555 339 Pfam O-methyltransferase 166 325 IPR002935 GO:0008171
Seca4g06555 339 Gene3D Vaccinia Virus protein VP39 142 338 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06555 Seca-Chr4 133489313 133493546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06555 122 335 Monolignol Biosynthesis Gene Families AT3G62000 73.853 3.02e-112 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06555 - - gmx:100776619 447.203