Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06526 ATGACAGATGTGCATGGAGATTCCATCGTGATTAGCTGTGATAGTCGATTTGAAAGTGCTCTTGAAGTGGACCATCTCAATAATGGACTACCATTAGAACCTCCCTTAGAGCCTTATGAAGGAATGGAGTTTGCATCAATTGAAGATGCAAAGACCTACTACACAAGCTACACAAAGAAGAAAGGTCTTAGTTTTCACATGGGTCGTGTTACTAAATCAAGAACAAATGGTATGATAATTGGTCAGGAGATCCTTTGTTCAAAGGAAGGGTTTCGAAGAAAAAAATGTGGAAGGGAAAATGGAAGCCTTGTAGAAGAGTGGGATGCAGGGCAACGTTATATATAA 345 0.3971 MTDVHGDSIVISCDSRFESALEVDHLNNGLPLEPPLEPYEGMEFASIEDAKTYYTSYTKKKGLSFHMGRVTKSRTNGMIIGQEILCSKEGFRRKKCGRENGSLVEEWDAGQRYI. 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06526 114 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 97 - -
Seca4g06526 114 Pfam FAR1 DNA-binding domain 52 98 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06526 Seca-Chr4 131684458 131684802 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g06526 FAR1 2.1e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06526 - - psat:127129645 121.709