Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06515 ATGGATATAGTTTATGCAATTGCTGCAAAATTAGCTGAGTTCACTGTTGCCCCTGTTGTACGTCAACTTGGTTACCCAATCTTGTACAAGAGCAATGTTGAAAAGCTCAAGAAGGAGGTTCAGAAGCTGGAGGATTCCATTAATGAAGTGCAACACTCAGTTGATGCTGCTAATAGGAATGGTGAAGATATTGAAGATGGTGTCCAGAGATGGTTGACTAAAGGGGAAAACATTGTTGCTGATGCAAAGAGATTCCATGACAATGAAGGCCATGCAAAAGTTGGGTGTTCTAATTGTTCATTTCCAAATCTGTGGCTAAGGCACAAGCTGAGCAGGAAAGCTACAAAGATGGCACAAGGTGTTTCTGAAATGATAGCTGAAGGGAAATTTGAGAGAATTTCTTACCGTTCCTATACTCAGATGTCAATCACACCATTTGCTAGGGGTTATGAGGCCCTGGACTCCAGAACATATATGTTGAATGAGATTAAGCAGGCATTGAAGGATCCTAATTTCTATATGATTGGGATTTGTGGGATGGGTGGTGTGGGGAAGACAACACTGGTGAAAGAATTAGCCTGGCAAGCAGATAAAGATGGGTCCTTTGGTGTTGTTGTTATGGCTACTATAACTGATTCTTCAGATGAGAGAAGGATTCAAGGCCAACTTGCTGATGGCTTGGGACTGAAATTTGAAGAGGAGACAGAAGGAGGAAGAGCAGGACGATTACGTCAAAGGATAAGCAAGGAGAAGAGTATTCTTGTCATTCTAGATAATATATGGAGCAAGCTGGATTTGACTGAAGTTGGGATTCCTTTTGGTGATGTCCACAAAGGATGCAAGTTATTGCTAACATCCAGATATCTTAATGTGCTTAACTGTGAGATGGGTACTCAAAAAGATTTTAGACTTGATGTTTTATCTGAAGAGGAGAGTTGGTATTTGTTTGAGAAAACAGTGGGGGATGCTGTCAAAGATTACAATATAAAACCTATTGCAATTAAAGTGGCTAGATGTTGTGCTGGTTTGCCACTTCTAATAGTTACTGTGGCAAAGGCTTTGAGCAAAAAGGATGTGTATGCTTGGAAGGATTCCATAATTCAATTAGAGAGATTTGATCATGAAGGGCTGCATAAGAAGGTATACTCTACTTTGGAATTAAGTTATAATTATCTAGAAAATAATGAACTGAAGTCAGTGTTCTTATTCATTGGTTCATTTGGACTAGATTACATCCACACTGGAGAATTGTTTTCATGTTATTGGGGGTTGGGCTTATGTAGACATGCTCACACATTGATTGAGGCAAAAAACAGATATTACAAATTGATAAATGACCTCAAGGACTCTTCATTGTTACTTGAGTTTGAAAGTGAATGGGTTAGAATGCATGATGTTGTTAGAGATGTGGCCAAATCAATTGCATACAGGACTCAACCAGCCTATGCTGTGCAAAGGTTCACCGAAATAAAAAAATGGCCAGAGATAGATCAACTTCAAAAGTGCCATTCCATTATCTTGCCTTGGTCTTATATTTATGAACTTCCTGAGATGTTAGAGTGCCCAGAGTTGAAGCTACTTCTACTTCATACTGTAGGTGAACATTTGAAAGTCCCTGACAACTTTTTCTCTGGGATGAGAGAAGTAAAGGTTCTTGATTTATATGGAATGATGTTCTCCCCTTCTCCACCTCCATCTCTTCGTCTCTTGACAAACCTCAGATCATTGAGTCTGGCTGGATGTGTGTTGGAAGACATATCTATAGTTGTAGAACTGAGAAGTTTAGAGATTCTCAGCCTTGAAAGATCGGATATTAAAGAGCTCCCAAAAGAAATAGGGCAACTAGCTCATCTTCGAATGCTGAATTTAACAAACTGTTCTGGGCTAAGAAACATTCCTGCAAATCTTATTTCAAGTTTAACATGCTTGGAAGAGTTGTACATGGGGAATTGCTTTATCCAATGGGATGTCAAGGGACGCAATGATCAAAGTGAAAATGCAAGTCTAGATGAGCTAAGGAATTTGTCTCAGCTAACAACTTTGGACATAATGATTCAAGATGCTTCGGTTTTGCCCAGGGACATGCAGATTTTTGAAAAGCTTGAAAGATACAACATATTTATTGGTGATATGTGGAAATGGTCTTTACTATGGTCTGGTGGTGCTTCTGAATCTTCAAGAACACTTAAGTTCACAGAGAGTAAGGGTACAAGCATTCTTTTGGATCATGGGTTTAACTTCTTGTTGAATTCAGTTGAGGACTTGTGCTTAGCTGGATTACAGTGTATTAGACATGTTCTTTATGAGTTGAACAAGGAAGGTTTTCCACAATTAAAGCATTTGTGCATTCAATACAGTGCTGAATTGAAGTACATCATTAACTCAGTGGGGTGGCTTCATCCCTACACTGCCTTCCCCAACTTAGAGACTTTGGTTCTTCAAAATCTGTTTAATCTGGAAGAAATTTGCCATGGCCCAATTCCTATTCGATCTTTTACCAATCTTAAATCTATTGAAGTCAAAGGTTGTGATAAGTTGAAGAACCTGTTGTGGTATTCCCTTGTTAGAGACCTTCCTCAACTTCTTGAAATACAAATTTCTGACTGCAAATTGATGACAGAAATCATAGCTCCGCAAACACCTGAGGCTGATAAAGAAATCGACAAGATTGTGTTCCCTAAGTTGCATTCTCTTACTCTTGAATGTTTACCTAGTCTTGTTAGTTTCTGTTCCCTGCCATTGACAACTGATACGAGATTCACAAAGTGTGTTGAGAAGAATGATGACTCACAATCCATACCTGTGGCTCTAATGGATCAAAAGGTTGGGATGCCCCATCTTGAAACCCTGAAGCTGTCAAAAATCAATTCTTGGAAATTATGGGATGACAACCTTCAGGGTCATTCTTGCATTCAAAACTTGACGAGTTTGAAAATTGACAAATGTGGTAACATAGCATATATATTCTCATCCTTGGTGGCTAGAGAACTTGTAAACCTGCAGTACCTTGAGATTAGTAACTGCCAAATGTTGAAGGAGATATTTGTCTTTGATGGGAAGTCGGGTAATCTTCCTTCAGCTCACGAACCACTCTCTAATAAGGATGTGAGAACTGTCTTCAACTCTGTTATATTCCCAAACTTGGAGACATTGATAATCTCCCACATGGATCAGTTGGAGTCAGTATGGCACAATCAATTAGCTCCTAATTCCTTCTGCAAACTGAAGAAGTTGCAAACTAAATTTTGCAACAAATTATTAAATGTAATCCCATCTTATATGCTTAATAAATTACAGAATCTAGAGACAATGATTGTAACCAATTGTCCTGTGCTGGAAGTTGTATTTGAAATACAAGGTCTAAAATCAGGAATTGATAGCCAGGCAGAGCTGCAAATGCAATTGAGAAATCTCACTTTGGAACATCTACCAATGCTAAAAAACATTTGGAGCAAAAATCCTTATGGAAGCCTCAGGTTTGAAAACCTCTGCCAATTAAAAGTGACTGAATGTAAAATCCTTAATCAGGTTTTTCCGCTCTCTGTGGCTAAAGAGCTTCAGCATCTCCAAATGCTTCATATAGAAAAATGTGGTGTGGAGAATATTGTAGCACATGATGAAATGGATGACACAGCTCCAATACTTGTTTTCCCAGAATTAACATCTTTGAATTTTCGAAGTTTAACACAACTTAGAAGCTTCTATCAAGGATTACTCACCTTGGATTGTCCAGTTTTAAGAGATTTGGATGTTCATCATTGTGATCAGCTAGCACTATTTACTCCAAAGTCTTTAAACTACCAAGGGAACGTCCCAAGTGATCCACAACCCCTACTCTCATTTGAAAAGGTAATCCCCAACATAAGGGAGCTTATTCTGAGCAGCAAGGATGTATCTATGTTATGCAATGGTCAACTTAACGATGAGCTTATTTACACTGTAAAAGCTCTTCGCCTGCGATGCTTTCATGTTGAGTCTGACAAATTTCCATCAGGTTTCCTCCAAAGATTTATCAATCTTGAAAGTCTTAAGGTGACATGCAGTTCCTTCATAGAGATTTTCTCAAGCGAAAGCTTTGGCAGGGGACCTTTTGAGACAACTATGAAGTTGAGAAGTCTAATACTTGCTCAATTAAATAACCTCAAGTTTATATGTAAAGACCAATCTGAGATGCAATCCATTCTTCAAAATCTTGAGTCTTTGAAAGTATATCGATGTTCTAGCCTGAAGATTATACTTCCATCCTGGATGCTATTTCAGAATTTAGAAGAGTTATGGGTGCAAGGTTGTGCTGGATTGGAAAATATTATTACACCAGCAGCAGCCACTAGTTTACTTAACCTTCGAAAACTATGTATACTTGATTGTGAAAAGATAGAAGAAATTGTTGCAAGCGATGATGAAAGTAATGCTAGTGAGCTGGCTTTTATAAAATTGAAGCATTTGCAGTTTAGAAACTTACCAAGGCTAAGAAGATTTTGCAAGGGAAGTTACAGCTTCAAATTTCCATTACTGGAAAAGTTATTTGTGATCAATTGTCACATAATGGAAACTTTCTCATATGGAGCAATCAGTGCCCCAAAGCTCAGAGAAGTATATGTAAAGCCACAAAAAGAATGGCATTGGAATGGTGACCTCAATACTACTATAAGAAAAGTTTTTACTGAAACGAATTTCCAGGATGACTGA 4689 0.3824 MDIVYAIAAKLAEFTVAPVVRQLGYPILYKSNVEKLKKEVQKLEDSINEVQHSVDAANRNGEDIEDGVQRWLTKGENIVADAKRFHDNEGHAKVGCSNCSFPNLWLRHKLSRKATKMAQGVSEMIAEGKFERISYRSYTQMSITPFARGYEALDSRTYMLNEIKQALKDPNFYMIGICGMGGVGKTTLVKELAWQADKDGSFGVVVMATITDSSDERRIQGQLADGLGLKFEEETEGGRAGRLRQRISKEKSILVILDNIWSKLDLTEVGIPFGDVHKGCKLLLTSRYLNVLNCEMGTQKDFRLDVLSEEESWYLFEKTVGDAVKDYNIKPIAIKVARCCAGLPLLIVTVAKALSKKDVYAWKDSIIQLERFDHEGLHKKVYSTLELSYNYLENNELKSVFLFIGSFGLDYIHTGELFSCYWGLGLCRHAHTLIEAKNRYYKLINDLKDSSLLLEFESEWVRMHDVVRDVAKSIAYRTQPAYAVQRFTEIKKWPEIDQLQKCHSIILPWSYIYELPEMLECPELKLLLLHTVGEHLKVPDNFFSGMREVKVLDLYGMMFSPSPPPSLRLLTNLRSLSLAGCVLEDISIVVELRSLEILSLERSDIKELPKEIGQLAHLRMLNLTNCSGLRNIPANLISSLTCLEELYMGNCFIQWDVKGRNDQSENASLDELRNLSQLTTLDIMIQDASVLPRDMQIFEKLERYNIFIGDMWKWSLLWSGGASESSRTLKFTESKGTSILLDHGFNFLLNSVEDLCLAGLQCIRHVLYELNKEGFPQLKHLCIQYSAELKYIINSVGWLHPYTAFPNLETLVLQNLFNLEEICHGPIPIRSFTNLKSIEVKGCDKLKNLLWYSLVRDLPQLLEIQISDCKLMTEIIAPQTPEADKEIDKIVFPKLHSLTLECLPSLVSFCSLPLTTDTRFTKCVEKNDDSQSIPVALMDQKVGMPHLETLKLSKINSWKLWDDNLQGHSCIQNLTSLKIDKCGNIAYIFSSLVARELVNLQYLEISNCQMLKEIFVFDGKSGNLPSAHEPLSNKDVRTVFNSVIFPNLETLIISHMDQLESVWHNQLAPNSFCKLKKLQTKFCNKLLNVIPSYMLNKLQNLETMIVTNCPVLEVVFEIQGLKSGIDSQAELQMQLRNLTLEHLPMLKNIWSKNPYGSLRFENLCQLKVTECKILNQVFPLSVAKELQHLQMLHIEKCGVENIVAHDEMDDTAPILVFPELTSLNFRSLTQLRSFYQGLLTLDCPVLRDLDVHHCDQLALFTPKSLNYQGNVPSDPQPLLSFEKVIPNIRELILSSKDVSMLCNGQLNDELIYTVKALRLRCFHVESDKFPSGFLQRFINLESLKVTCSSFIEIFSSESFGRGPFETTMKLRSLILAQLNNLKFICKDQSEMQSILQNLESLKVYRCSSLKIILPSWMLFQNLEELWVQGCAGLENIITPAAATSLLNLRKLCILDCEKIEEIVASDDESNASELAFIKLKHLQFRNLPRLRRFCKGSYSFKFPLLEKLFVINCHIMETFSYGAISAPKLREVYVKPQKEWHWNGDLNTTIRKVFTETNFQDD. 1563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06515 1562 Gene3D Ribonuclease Inhibitor 1120 1273 IPR032675 -
Seca4g06515 1562 Gene3D Ribonuclease Inhibitor 469 713 IPR032675 -
Seca4g06515 1562 SUPERFAMILY L domain-like 943 1263 - -
Seca4g06515 1562 Gene3D Ribonuclease Inhibitor 714 913 IPR032675 -
Seca4g06515 1562 SUPERFAMILY RNI-like 1285 1534 - -
Seca4g06515 1562 Gene3D - 306 393 IPR042197 -
Seca4g06515 1562 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1310 1529 - -
Seca4g06515 1562 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 404 IPR027417 -
Seca4g06515 1562 Gene3D Ribonuclease Inhibitor 1282 1529 IPR032675 -
Seca4g06515 1562 Gene3D - 145 305 IPR027417 -
Seca4g06515 1562 Gene3D Ribonuclease Inhibitor 923 1119 IPR032675 -
Seca4g06515 1562 PRINTS Disease resistance protein signature 174 189 - -
Seca4g06515 1562 PRINTS Disease resistance protein signature 613 629 - -
Seca4g06515 1562 PRINTS Disease resistance protein signature 340 354 - -
Seca4g06515 1562 PRINTS Disease resistance protein signature 247 261 - -
Seca4g06515 1562 Coils Coil 33 60 - -
Seca4g06515 1562 SUPERFAMILY L domain-like 462 912 - -
Seca4g06515 1562 Pfam NB-ARC domain 157 390 IPR002182 GO:0043531
Seca4g06515 1562 SMART AAA_5 171 373 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06515 Seca-Chr4 131427506 131434860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06515 175 477 WRKY Transcription Factor Family AT5G45050 25.000 1.33e-06 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06515 - - mtr:25487104 1955.26