Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06508 ATGACCGAAGAAGACAAACCCAGAGCCTTCTCCGGCGACCACCACCACCACCCTCCACCGCAGCCTCAGCCTTTCCCGGCGGCTCAATACGGCACCTTCCAAGGCGTTTCTAACTACCCTCCTCCTCCGCCTGACCCACATCCCGCCATCGGCTTCCCTCACCCCGTTCCGCCGCCCGGCGCCGTCGATCCTTCCGCCCCTCCTCCGCCGTATTATCCTCACGGGTACCAAGCAGTTCCCGGTTATGCAGTTGCTGAAGGAAGACCTGTGAGAGAACGCCGCCTTGGTTGCTGTGGTCTTGGTTGCGGTTGGTGCCTGTTTATATTAGGTTTCTTTCTTGGTGGTATTCCATGGTATGTTGGGGCGATAATTATGCTTTGTTCCAGAGTAGACTACCGAGAGAAACCTGGATATATTGCTTGTATAGTTGCTGTAAGTATCATTTTTCACTTGAAGCTTGTTTCAGTTCTTAAATTCTGTAGATTCTTTTAG 492 0.5264 MTEEDKPRAFSGDHHHHPPPQPQPFPAAQYGTFQGVSNYPPPPPDPHPAIGFPHPVPPPGAVDPSAPPPPYYPHGYQAVPGYAVAEGRPVRERRLGCCGLGCGWCLFILGFFLGGIPWYVGAIIMLCSRVDYREKPGYIACIVAVSIIFHLKLVSVLKFCRFF. 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06508 163 MobiDBLite consensus disorder prediction 1 15 - -
Seca4g06508 163 MobiDBLite consensus disorder prediction 37 64 - -
Seca4g06508 163 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 148 IPR044804 -
Seca4g06508 163 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06508 Seca-Chr4 131137436 131141513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06508 3 154 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 30.097 1.66e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06508 - - gmx:100781376 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06508 4 131137436 131141513 Seca4g06508 4 131137436 131141513 ECH