Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06500 ATGGAATGGGCCATAACTGCAGGTATAATTTGCATGTTGATACTTGTTCTGACATGGGCATGGAGGGCGCTGAACTGGTTATGGTTGAGGCCGAAGAAGCTAGAGAGGTTGCTAAGAGAGCAAGGCCTTAAAGGGAATCGATATAGACTTTTGGTTGGGGACATAAAGGAGCTTAACAAAATGGAAACCGAAGCCAAATCCAAACCCATAAATCTCTTTGACGATATCGTAACCCGAGTGTTTCCTTATGTCCAACAAAGTGTCAACATATATGGCAAGAATTCTTTTATCTGGTTTGGAACAACACCAAGGGTGACCCTAACAGATCCTGACCTAATCAAAGATGTATTTAACAAGATGCATGACTTCCCAAAGATCCATATTCCAATTTTCAAGTTACTAGCTGCTGGTCTTGCGAACTATGAAGGAGAAAAGTGGAGCAAGCACAGAAGGTTAATCAACCCTGCATTCCATTTAGAAAAATTGAAGGTTATGATTTGCCCTTTACTAATACTAAAAATTATGATACCAATATTCTTCAAAAGTTGCAATGATCTGATCAACAAATGGGAGGGAATGTTGTCTTCGGATGGATCGTGTGAAATTGACGTATGGCCTTTCCTTCAGAATTTGGCCAGTGACGTTATTTCTCGAACATCTTTTGGTAGTAGTTATGAAGAAGGAAGAAGGGTATTCCAACTTCAAAAAGAGCAAGCCGAACTTATAATGAAAGTTGTAGTGAAACTTTTCATCCCTGGATGGAGGTTTCTACCTACTACTAGTAATAGGAGGATGAAGGAAATTGACAGAGACATAAAAGCTTCACTTAAGAACATTATCAACAAGAGAGAGAAAGCACTAAAGGCAGGTGAAGCCACTAAGAATGACTTATTAGATATTCTGCTGGACTCAAATCACAAGGAAATTCAACAACACGGAAACAACAAGAATGTTGGAATGAGTCTTGAAGATGTAATAGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAGACCACTTCAGTTTTGCTTGTTTGGACAATGGTATTATTGAGTAGATACCCTCATTGGCAAGCACGTGCAAGGGAGGAAGTGTTTCAAGTCTTTGGAAACCAAAAACCAGATTTTAATGGGCTAAGTCAACTAAAGATTGTGACCATGATTTTGTATGAGGTTCTTAGATTATACCCTCCAGTACTTGCGCTTGCTCGAACTGTTCACAAAGACTTGAAACTTGGAAACTTAACATTACCTGCTGGAGTGGAGGTTTCCATGCCAATAGTTTTGGTTCACCATGACCGGGAACTTTGGGGTGATGATGCTAAGGAGTTCAATCCTGAAAGATTTTCTGAAGGAGTTTTAAAGGCTACAAAGGGCAGGGTTTCATTTTTCCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTTTCCTTGTTGGAAGCGAAGATGGCTTTGTCAATGATTTTACAAAGTTTCTCATTCGAACTTTCTCCATCCTATGCTCATGCTCCAGCTACGATAATTACTCTTCAGCCACAATATGGTGCTCATATCGTTCTACGTAAAGTGGAAACGTAA 1584 0.3977 MEWAITAGIICMLILVLTWAWRALNWLWLRPKKLERLLREQGLKGNRYRLLVGDIKELNKMETEAKSKPINLFDDIVTRVFPYVQQSVNIYGKNSFIWFGTTPRVTLTDPDLIKDVFNKMHDFPKIHIPIFKLLAAGLANYEGEKWSKHRRLINPAFHLEKLKVMICPLLILKIMIPIFFKSCNDLINKWEGMLSSDGSCEIDVWPFLQNLASDVISRTSFGSSYEEGRRVFQLQKEQAELIMKVVVKLFIPGWRFLPTTSNRRMKEIDRDIKASLKNIINKREKALKAGEATKNDLLDILLDSNHKEIQQHGNNKNVGMSLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPHWQARAREEVFQVFGNQKPDFNGLSQLKIVTMILYEVLRLYPPVLALARTVHKDLKLGNLTLPAGVEVSMPIVLVHHDRELWGDDAKEFNPERFSEGVLKATKGRVSFFPFGWGPRICIGQNFSLLEAKMALSMILQSFSFELSPSYAHAPATIITLQPQYGAHIVLRKVET. 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06500 527 Pfam Cytochrome P450 88 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06500 527 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06500 527 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06500 527 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06500 527 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06500 527 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06500 527 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06500 527 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06500 527 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06500 527 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06500 527 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06500 527 Gene3D Cytochrome P450 28 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06500 527 FunFam Cytochrome P450 734A1 28 526 - -
Seca4g06500 527 SUPERFAMILY Cytochrome P450 77 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06500 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Seca4g06500 527 CDD CYP72 81 521 - -
Seca4g06500 527 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06500 Seca-Chr4 130630367 130634821 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06500 1 525 Cytochrome P450 AT3G14690 57.955 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06500 - K23809 gmx:100808323 801.971