Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06497 ATGATGGGTGTGACTCCTACAACTGCAACATGCTTTCTCATAGTGGTGCCTCTGGCTCTACTATGGGCATGGAAGCTGCTGAATTGGATATGGCTGAGGCCAAAGAGACTAGAGAAACTGTTGAGATCGCAGGGTCTTCAAGGCAATTCATACAGGCTTTTAGTTGGGGATAGTGTGGAGATGTTTAAGATGTTCAAGGAAAATGCCAAATCTCAACAATCCAAGAGTTCTCTCTCAGATGACAAGGATGTAACACCGCATGTCTTCACATTTATGCATCACATCGTCGACAAATTCGGCAAGAATTCATTTTTATGGGATGGTCCTAAACCAAAAGTGATCATTACAAACCCTGAGCAAATCAAAGAAATCTTTAACAGAATCCAAGACTTTGAGAAACCTAAGTTGAGCCCCCGTCTCAAGCTGTTGGGCAAAGGACTTGCAAATTATGAGGGCGAGAAATGGCGGATACATCGAAAGATTATCAACCCTGCTTTCCATCTACAAAAATTGAAGGTTATATATTATGTTTCCATTACACTACAGGACATGGTACCTACATTTTTTCAATGCGCTGATGAGATGGTTAGCAAATGGGAAGAAATGTTGTCTTCAGATGGAAAGTGTGAAATCGATGTATGGCCTTTCCTTCAAATTTTGACCAAAGATGTTATTTCTAGAACAGCATTTGGAAGCAGTTACGAAGAGGGAGAAAGAGTATTCCAACTTCTGACAGAGCAAGCTGGAGTTCTTTTGAAATCAGTGAACCATTACATTCCAGGATCGTGGTTACTACCAACAGCTACAAATAGGAAGATGAATGAAATTGATAGAAATATTCAAGCATCACTGAGAGCAATCATCAACAAACGAGAGAAAGCAATGGAGGCTGGTGAAGTCCTAAACAATGATTTATTGGGCATGCTTTTGGAATCAAATCACAATGAAATACAAGAACATGGAAACAATAAGAAAATTGGAATGACCAACCAAGAAGTAATTGAGGAATGCAATGCATTCTACCTAGCTGGTCAAGAAACCACTTCAGCCTTACTCGTTTGGGCAATGGTGTTTTTGGGTAGATATCCTGATTGGCAAGCACGTGCTAGGGAGGAAGTCTTTCAAGTTTTTGGAAACCAAAAGCCAAACAGTGATGGGCTAAGTAGCCTTAAAATTATGACCATGATTCTATACGAGGTTCTAAGGTTATACCCACCTGTGCTTTTCTTCAATAGAGTTGTTCACAAAGATGTGAAACTTGGGAACCTTACCCTGCCTGCAGGAGTACATGTTTCCTTACCAATACTCTTGATTCACCATGATCGTGATATCTGGGGTGATGATGCTACTGAGTTTAAACCAAAGAGATTTTCTGAAGGAGTTGCCAAGGCGACTAAAGGACAAGTCTCATTTTTCCCATTTGGATGGGGTCCTAGACTCTGCATTGGGCAAAACTTTGCTATAATGGAAGCAAAGATGGCTTTATCACTACTTTTACAACGTTTCTCATTTGAACTTTCCCCGGCCTATGCACATGCTCCAATGACGAGGCTCACTCTTAATCCAAAATTTGGGGTTCATGTCATCTTGCACAAACTGTAG 1602 0.407 MMGVTPTTATCFLIVVPLALLWAWKLLNWIWLRPKRLEKLLRSQGLQGNSYRLLVGDSVEMFKMFKENAKSQQSKSSLSDDKDVTPHVFTFMHHIVDKFGKNSFLWDGPKPKVIITNPEQIKEIFNRIQDFEKPKLSPRLKLLGKGLANYEGEKWRIHRKIINPAFHLQKLKVIYYVSITLQDMVPTFFQCADEMVSKWEEMLSSDGKCEIDVWPFLQILTKDVISRTAFGSSYEEGERVFQLLTEQAGVLLKSVNHYIPGSWLLPTATNRKMNEIDRNIQASLRAIINKREKAMEAGEVLNNDLLGMLLESNHNEIQEHGNNKKIGMTNQEVIEECNAFYLAGQETTSALLVWAMVFLGRYPDWQARAREEVFQVFGNQKPNSDGLSSLKIMTMILYEVLRLYPPVLFFNRVVHKDVKLGNLTLPAGVHVSLPILLIHHDRDIWGDDATEFKPKRFSEGVAKATKGQVSFFPFGWGPRLCIGQNFAIMEAKMALSLLLQRFSFELSPAYAHAPMTRLTLNPKFGVHVILHKL. 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06497 533 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06497 533 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06497 533 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06497 533 PRINTS P450 superfamily signature 481 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06497 533 Pfam Cytochrome P450 87 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06497 533 SUPERFAMILY Cytochrome P450 86 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06497 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Seca4g06497 533 Gene3D Cytochrome P450 34 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06497 533 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 525 - -
Seca4g06497 533 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06497 533 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06497 533 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06497 533 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06497 533 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06497 533 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06497 533 CDD CYP72 89 529 - -
Seca4g06497 533 FunFam Cytochrome P450 734A1 31 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06497 Seca-Chr4 130557332 130562962 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06497 14 533 Cytochrome P450 AT3G14690 53.257 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06497 - K17873 gmx:102667924 798.119