Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06496 ATGATGGGTGTGACTCCTACAACTGCAACATGCTTTCTCATAGTGGTGCCTCTGGCTCTACTATGGGCATGGAAGCTGCTGAATTGGATATGGCTGAGGCCAAAGAGACTAGAGAAACTGTTGAGATCGCAGGGTCTTCAAGGCAATTCATACAGGCTTTTAGTTGGGGATAGTGTGGAGATGTTTAAGATGTTCAAGGAAAATGCCAAATCTCAACAATCCAAGAGTTCTCTCTCAGATGACAAGGATGTAACACCGCATGTCTTCACATTTATGCATCACATCGTCGACAAATTCGGCAAGAATTCATTTTTATGGGATGGTCCTACACCAAAAGTGATCATTACAAACCCTGAGCAAATCAAAGAAATCTTTAACAGAATCCAAGACTTTGCGAAACCTAAGTTGAGCTCACGTCTCAAGCTGTTGGGCAAAGGACTTGCAAATTATGAGGGCGAGAAATGGTGGATACATCGAAAGATTATCAACCCTGCTTTCCATTTAGAAAAATTGAAGGTTATATATTTTCTAAATTATGTTTACACTTCAGACATGGTACCTACATTTTTTCAATGCTCTGATGAGATGGTTAGGAAATGGGAAGAAATGTTGTCTTCAGATGGAAAGTGTGAAATCGATGTATGGCCCTTCATTCAAATTTTGACCAAAGATGTTATTTCTAGAACATCATTTGGAAGCAGTTACGAAGAGGGAGAAAGAATATTCCAACTTCTGACAGAGCAAGCTGGAGTTCTTTTGAAATCAGTGAACCATTACATTCCAGGATCGTGGTTACTACCAACAGCTACAAATAGGAAGATGAATGAAATTGATAGAAATATTCGAGCATCACTGAAAGCTATCATCAACAAACGAGAGAAAGCAATGGAGGCTGGTGAAGTCCTAAACAATGACTTATTGGGCATGCTTTTGGAATCAAATCACAATGAAATACAAGAACATGGAAACAATAAGAAAATTGGAATGACCAACCAAGAAGTAATTGAGGAATGCAATGCATTCTACCTAGCTGGTCAAGAAACCACTTCAGCCTTACTCGTTTGGGCAATGGTGTTTTTGGGTAGATATCCTGATTGGCAAGCACGTGCTAGGGAGGAAGTCTTTCAAGTTTTCGGAAACCAAAAGCCAAACAGTGATGGGCTAAGTAGCCTTAAAATTATGACCATGATCCTATACGAGGTTCTAAGGTTATACCCACCTGTGCTTTTCTTCAATAGAGTTGTTCACAAAGATGTGAAACTTGGAAACCTTACCCTGCCTGCAGGAGTACATGTTTCCTTACCAATACTCTTGATTCACCATGATCGTGATATCTGGGGTGATGATGCTACTGAGTTTAAACCAGAGAGATTTTCTGAAGGAGTTGCCAAGGCAACTAAAGGACAAGTCTCATTTTTCCCATTTGGATGGGGTCCTAGACTCTGCATTGGGCAAAACTTTGCTATAATGGAAGCAAAGATGGCTTTATCACTACTTTTACAACGTTTCTCATTTGAACTTTCCCCAGCCTATGCACATGCTCCAATGACGAAGCTCACTCTTAATCCAAAATTTGGGGTTCATGTCATCTTGCACAAACTGTAG 1605 0.4019 MMGVTPTTATCFLIVVPLALLWAWKLLNWIWLRPKRLEKLLRSQGLQGNSYRLLVGDSVEMFKMFKENAKSQQSKSSLSDDKDVTPHVFTFMHHIVDKFGKNSFLWDGPTPKVIITNPEQIKEIFNRIQDFAKPKLSSRLKLLGKGLANYEGEKWWIHRKIINPAFHLEKLKVIYFLNYVYTSDMVPTFFQCSDEMVRKWEEMLSSDGKCEIDVWPFIQILTKDVISRTSFGSSYEEGERIFQLLTEQAGVLLKSVNHYIPGSWLLPTATNRKMNEIDRNIRASLKAIINKREKAMEAGEVLNNDLLGMLLESNHNEIQEHGNNKKIGMTNQEVIEECNAFYLAGQETTSALLVWAMVFLGRYPDWQARAREEVFQVFGNQKPNSDGLSSLKIMTMILYEVLRLYPPVLFFNRVVHKDVKLGNLTLPAGVHVSLPILLIHHDRDIWGDDATEFKPERFSEGVAKATKGQVSFFPFGWGPRLCIGQNFAIMEAKMALSLLLQRFSFELSPAYAHAPMTKLTLNPKFGVHVILHKL. 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06496 534 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06496 534 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06496 534 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06496 534 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06496 534 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06496 534 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06496 534 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06496 534 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06496 534 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06496 534 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06496 534 Pfam Cytochrome P450 87 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06496 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Seca4g06496 534 SUPERFAMILY Cytochrome P450 86 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06496 534 Gene3D Cytochrome P450 34 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06496 534 CDD CYP72 89 530 - -
Seca4g06496 534 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 526 - -
Seca4g06496 534 FunFam Cytochrome P450 734A1 31 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06496 Seca-Chr4 130532741 130542339 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06496 14 534 Cytochrome P450 AT3G14690 52.581 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06496 - K17873 gmx:102667924 781.556