Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06495 ATGGAAGCAGCATGGAGCATAATTGGAGGCATAATTCTCATCATGGTGATACTTTTTCTGATATGGGCATGGAGGATACTGAATTGGTTATGGCTGAGGCCAAAGAAGCTAGAGAAGCTGCTAAGAGAGCAAGGCCTTAAAGGGAATCCATACAGGCTTTTGGTTGGGGACTCAAAGGAGCTTCTGAAGATGCGAAATGAAGCCATGTCCAAACCCATGAATTTATCTGATGATATTGCACCACGTGTGCTGTCCTATTTGCATCACAGTGTCAACCAACATGGAAAGAATTCTTTTATCTGGTTTGGACCAAAACCAAGGGTGACCCTCACAGAACCTGAGCAAATCAAAGATGTATTCAATAAGATCTATGACTTCCCAAAGCCTGATACGAATCCACTTGTCAAGTTACTAGCCACTGGTCTTGCAAACTATGAGGGAGAAAAGTGGAGCAAACACAGAAGGATAATCAACCCTGCATTCAATTTAGAAAAACTGAAGATCATGTTACCAGTATTCTTCAAAAGTTGCAATGATCTAATTAGCAAATGGGAGGGAATGTTGTCTTCAGATGGATCATGTGAAATGGATGTATGGCCTTTCCTTCAGAATTTGACCAGTGATGTTATTTCTAGAACAGCATTTGGAAGTAGTTATGAAGAAGGAAAAAGAATTTTTCAACTTCAAAAAGAGCAAGCTGAACTTACAATTAAAGTTTTCATGAAAGTTTACATCCCTGGATGGAGGTTTCTACCTACTGCTATTAATAGGAGGATGAAGGAAATTGATAGAGATACAAAAGCTTCGCTTAAAGATATTATTAACAAGAGAGAGAAAGCACTAGAGGCAGGGGAAGCCACTAAGAATGACTTATTGGGTATTCTGTTGGAGTCAAATCACAAGGAAATGCAAGAAAATGGAAACAATAAGAATGTTGGAATGAGTCTTGAAGATGTAATAGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAGACAACTTCAGTTTTGCTTGTTTGGACAATGGTGTTATTGAGTAGGTACCCTCATTGGCAAGCACGTGCAAGGGAGGAAGTGTTTCAAGTCTTTGGAAACCAAAAACCAGATTTTGATGGACTAAGTCACCTAAAGATTGTCACCATGATTTTGTATGAGGTTCTGAGGTTATACCCACCAGCACTATGGCTTATTCGAACTACTCACAAAGATATGAAACTTGGAAAACTAACATTACCTGCTGGAGTGGAGGTTTCCTTACCAATACTTTTGGTTCACCATGACAGTGAGCTATGGGGTGATGATGCTAAGGAGTTCAATCCTGAGAGATTTTCTGAAGGACTTCTAAAAGCAACAAATGGCAGAGTTCAGTTTTTTCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTTTCCCTGTTGGAAGCAAAGATGGCTCTGTCACTGATTTTACAACATTTCTCCTTTGAACTTTCTCCAGCCTATACTCATGCTCCAAATGCAGTAATCACTGTTCAGCCACAATTTGGTGCTAATATTATTCTACGAAAAGTAGTAACATAA 1566 0.394 MEAAWSIIGGIILIMVILFLIWAWRILNWLWLRPKKLEKLLREQGLKGNPYRLLVGDSKELLKMRNEAMSKPMNLSDDIAPRVLSYLHHSVNQHGKNSFIWFGPKPRVTLTEPEQIKDVFNKIYDFPKPDTNPLVKLLATGLANYEGEKWSKHRRIINPAFNLEKLKIMLPVFFKSCNDLISKWEGMLSSDGSCEMDVWPFLQNLTSDVISRTAFGSSYEEGKRIFQLQKEQAELTIKVFMKVYIPGWRFLPTAINRRMKEIDRDTKASLKDIINKREKALEAGEATKNDLLGILLESNHKEMQENGNNKNVGMSLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPHWQARAREEVFQVFGNQKPDFDGLSHLKIVTMILYEVLRLYPPALWLIRTTHKDMKLGKLTLPAGVEVSLPILLVHHDSELWGDDAKEFNPERFSEGLLKATNGRVQFFPFGWGPRICIGQNFSLLEAKMALSLILQHFSFELSPAYTHAPNAVITVQPQFGANIILRKVVT. 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06495 521 CDD CYP72 84 515 - -
Seca4g06495 521 SUPERFAMILY Cytochrome P450 82 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 Pfam Cytochrome P450 87 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Seca4g06495 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 512 - -
Seca4g06495 521 Gene3D Cytochrome P450 74 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06495 521 FunFam Cytochrome P450 734A1 31 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06495 Seca-Chr4 130484445 130487768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06495 12 519 Cytochrome P450 AT3G14690 60.861 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06495 - K23809 gmx:100808323 866.3