LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca4g06492	ATGGAAGCAGCATGGACCATAATTGCAGGCATAATTCTCATCATGGTGATACTTCTTCTGATATGGGCATGGAGTATGCTGAACTGGTTATGGCTGAGGCCAAAGAAGCTAGAGAAGCTGCTAAGAGAGCAAGGTCTTAAAGGCAATCCATACAGGCTTTTGGTTGGGGACTCAAAGGAGTTTCTGAAGATGCAAAATGAAGCCATGTCCAAACCCATGAGTCTATCTGATGATATAGTACCCCGTGTGTTTTCCTATGCCCAACATAGTGTCAACAAACACGGAAAGAATTCTTTTATCTGGTTTGGACCAATGCCAAGGGTGACCCTCACAGATCCTGAACTAATCAAAGATGTATTTAACAAGATCGATGACTTCCCAAAGCCTAATACAAATCCGCTGGTCAGGTTACTAGCTACTGGTCTTGTAAGCTTTGATGAAGAAAAGTGGAGCAAGCACAGAAGGATAATCAACCCTGCATTCCATTTAGAAAAATTGAAGATCATGTTACCAATATTCTTCAAAAGTTGCAATGATTTGATTAGCAAATGGGAGGGAATGTTGTCTTCAGATGGATCGTGTGAAATGGACGTATGGCCTTTCCTTCAGAATTTGGCTAGTGATGTTATTTCTAGAACAGCATTTGGAAGTAGTTATGAAGAAGGAAGAAGAATTTTTGAACTTCAAAAAGAACAAGCTAAGCTTGCAATGAAAGCCATGATGAAAGTTTACATCCCTGGATGGAGGTTTCTACCTACTGCTAGTAATAGGAGGATGAAAGAAATCGACAGAGATATAAAAGCTTCACTTAAGGATATTATCAACAAGAGAGAGAAAGCACTAAAGGCAGGGGAAGCCACTATGAATGACTTATTAGATATTCTGCTTGACTCAAATCACAAGGAAATTCAACAACACAAAAACAATAAGAATGTTGGAATGAGTCTTGAAGATGTAATAGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAGACAACTTCAGTTTTGCTTGTTTGGACAATGGTGTTATTGAGTAGGTACCCTCATTGGCAAGCACGTGCAAGGGAGGAAGTGTTTCATGTCTTTGGAAACCAAAAACCAGATTTTGATGGACTAAGTCACCTAAAGATTGTCACCATGATTTTGTATGAGGTACTTAGGTTATACCCACCAGTACTTAGGCTTGCTCGAGCAGTTCGTAAAGATGTGAAACTTGGACACCTAACATTACCCGCTGGAGTGCAGGTTTCCTTACCAGTAGTTTTGGTTCACCATGACTGTGAACTATGGGGTGATGATGCTAAGAAGTTCAATCCTAAGAGATTTTCTGAAGGACTTCTAAAAGCAACAAATGGCAGAGTTACATTTTTCCCATTTGGAGGGGGTCCTAGAATATGCATTGGATAA	1410	0.4007	MEAAWTIIAGIILIMVILLLIWAWSMLNWLWLRPKKLEKLLREQGLKGNPYRLLVGDSKEFLKMQNEAMSKPMSLSDDIVPRVFSYAQHSVNKHGKNSFIWFGPMPRVTLTDPELIKDVFNKIDDFPKPNTNPLVRLLATGLVSFDEEKWSKHRRIINPAFHLEKLKIMLPIFFKSCNDLISKWEGMLSSDGSCEMDVWPFLQNLASDVISRTAFGSSYEEGRRIFELQKEQAKLAMKAMMKVYIPGWRFLPTASNRRMKEIDRDIKASLKDIINKREKALKAGEATMNDLLDILLDSNHKEIQQHKNNKNVGMSLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPHWQARAREEVFHVFGNQKPDFDGLSHLKIVTMILYEVLRLYPPVLRLARAVRKDVKLGHLTLPAGVQVSLPVVLVHHDCELWGDDAKKFNPKRFSEGLLKATNGRVTFFPFGGGPRICIG.	470

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca4g06492	469	FunFam	Cytochrome P450 734A1	31	469	-	-
	Seca4g06492	469	PANTHER	CYTOCHROME P450 FAMILY MEMBER	21	469	-	-
	Seca4g06492	469	Gene3D	Cytochrome P450	31	469	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca4g06492	469	Pfam	Cytochrome P450	87	469	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca4g06492	469	PRINTS	P450 superfamily signature	329	346	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca4g06492	469	PRINTS	P450 superfamily signature	458	467	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca4g06492	469	PRINTS	P450 superfamily signature	467	469	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca4g06492	469	PRINTS	P450 superfamily signature	381	392	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Seca4g06492	469	CDD	CYP72	84	469	-	-
	Seca4g06492	469	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	460	469	IPR017972	GO:0005506\|GO:0016705

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca4g06492	Seca-Chr4	130382562	130387076	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca4g06492	7	469	Cytochrome P450	AT3G14690	58.155	0.0	567

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca4g06492	-		K23809	gmx:100808323	763.837

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