Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06492 ATGGAAGCAGCATGGACCATAATTGCAGGCATAATTCTCATCATGGTGATACTTCTTCTGATATGGGCATGGAGTATGCTGAACTGGTTATGGCTGAGGCCAAAGAAGCTAGAGAAGCTGCTAAGAGAGCAAGGTCTTAAAGGCAATCCATACAGGCTTTTGGTTGGGGACTCAAAGGAGTTTCTGAAGATGCAAAATGAAGCCATGTCCAAACCCATGAGTCTATCTGATGATATAGTACCCCGTGTGTTTTCCTATGCCCAACATAGTGTCAACAAACACGGAAAGAATTCTTTTATCTGGTTTGGACCAATGCCAAGGGTGACCCTCACAGATCCTGAACTAATCAAAGATGTATTTAACAAGATCGATGACTTCCCAAAGCCTAATACAAATCCGCTGGTCAGGTTACTAGCTACTGGTCTTGTAAGCTTTGATGAAGAAAAGTGGAGCAAGCACAGAAGGATAATCAACCCTGCATTCCATTTAGAAAAATTGAAGATCATGTTACCAATATTCTTCAAAAGTTGCAATGATTTGATTAGCAAATGGGAGGGAATGTTGTCTTCAGATGGATCGTGTGAAATGGACGTATGGCCTTTCCTTCAGAATTTGGCTAGTGATGTTATTTCTAGAACAGCATTTGGAAGTAGTTATGAAGAAGGAAGAAGAATTTTTGAACTTCAAAAAGAACAAGCTAAGCTTGCAATGAAAGCCATGATGAAAGTTTACATCCCTGGATGGAGGTTTCTACCTACTGCTAGTAATAGGAGGATGAAAGAAATCGACAGAGATATAAAAGCTTCACTTAAGGATATTATCAACAAGAGAGAGAAAGCACTAAAGGCAGGGGAAGCCACTATGAATGACTTATTAGATATTCTGCTTGACTCAAATCACAAGGAAATTCAACAACACAAAAACAATAAGAATGTTGGAATGAGTCTTGAAGATGTAATAGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAGACAACTTCAGTTTTGCTTGTTTGGACAATGGTGTTATTGAGTAGGTACCCTCATTGGCAAGCACGTGCAAGGGAGGAAGTGTTTCATGTCTTTGGAAACCAAAAACCAGATTTTGATGGACTAAGTCACCTAAAGATTGTCACCATGATTTTGTATGAGGTACTTAGGTTATACCCACCAGTACTTAGGCTTGCTCGAGCAGTTCGTAAAGATGTGAAACTTGGACACCTAACATTACCCGCTGGAGTGCAGGTTTCCTTACCAGTAGTTTTGGTTCACCATGACTGTGAACTATGGGGTGATGATGCTAAGAAGTTCAATCCTAAGAGATTTTCTGAAGGACTTCTAAAAGCAACAAATGGCAGAGTTACATTTTTCCCATTTGGAGGGGGTCCTAGAATATGCATTGGATAA 1410 0.4007 MEAAWTIIAGIILIMVILLLIWAWSMLNWLWLRPKKLEKLLREQGLKGNPYRLLVGDSKEFLKMQNEAMSKPMSLSDDIVPRVFSYAQHSVNKHGKNSFIWFGPMPRVTLTDPELIKDVFNKIDDFPKPNTNPLVRLLATGLVSFDEEKWSKHRRIINPAFHLEKLKIMLPIFFKSCNDLISKWEGMLSSDGSCEMDVWPFLQNLASDVISRTAFGSSYEEGRRIFELQKEQAKLAMKAMMKVYIPGWRFLPTASNRRMKEIDRDIKASLKDIINKREKALKAGEATMNDLLDILLDSNHKEIQQHKNNKNVGMSLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPHWQARAREEVFHVFGNQKPDFDGLSHLKIVTMILYEVLRLYPPVLRLARAVRKDVKLGHLTLPAGVQVSLPVVLVHHDCELWGDDAKKFNPKRFSEGLLKATNGRVTFFPFGGGPRICIG. 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06492 469 FunFam Cytochrome P450 734A1 31 469 - -
Seca4g06492 469 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 469 - -
Seca4g06492 469 Gene3D Cytochrome P450 31 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06492 469 Pfam Cytochrome P450 87 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06492 469 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06492 469 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06492 469 PRINTS P450 superfamily signature 467 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06492 469 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06492 469 CDD CYP72 84 469 - -
Seca4g06492 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Seca4g06492 469 SUPERFAMILY Cytochrome P450 82 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06492 469 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06492 469 PRINTS E-class P450 group I signature 467 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06492 469 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06492 469 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06492 469 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06492 469 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06492 Seca-Chr4 130382562 130387076 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06492 7 469 Cytochrome P450 AT3G14690 58.155 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06492 - K23809 gmx:100808323 763.837