Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06491 ATGGAAGCAGCATGGGCCACAGCTGCAGGCCTGATTCCCATGATGTTGATACTTGTTGTTCTGATATGGTCATGGAGGTTGCTGAACCGGTTATGGCTGAGGCCGAAGAAACTAGAGAGGCTACTAAGAGAGCAAGGCCTTCAAGGGAATCCATACAGATTTTTGGTTGGAGACTTAAATGAAATACTAAAAATGGGAAATGAAGCCAAATCCAAACCCATGAATCTCTCTGATGATATAGTGCCCCGTGTCATTTCCTATTTCCAACATAGTGTCAACGAACACGGAAAGAATTCTTTCATCTGGTTTGGACCAATTCCAAGGGTGACCCTCACAGATCCTGAGCTAATCAAAGATGTACTTAACAAGATCTATGACTTCCCAAAGCTTAATACTAATTCGCTGCTCAAGTTACTAGCTACTGGTCTTGTTACCCTTGATGGAGAAAAGTGGAACAAGCACAGAAGGATAATCAGCCCTGCATTCAATTTAGAAAAATTGAAGATCATGTTACCAATATTCTTCGAAAGTTGCAATGACTTGATTAGCAAATGGAAGGGAATGTTGTCTTCAGATGGATTGTGTGAAATGGACGTATGGCCTTTCCTTCAGAATTTGGCTAGTGATGTTATTTCTAGAACAGCGTTTGGAAGTAGTTATGAAGAAGGAAAAAGAATATTTCAACTTCAGAAAGAGCAAGCAGAAATTACAATGAAAGTTATAAGGAAAGTTTACATCCCTGGATGGAGGTTTCTACCTACTACTACCCATAGGAGGTTGAAGGAAATTGACAAAGATATAAAAGCTTTGCTCAATGATATGATTAACAAGAGGATGAGAGCACTAAAAGCGGGTGAAGCCACTAACAATGACTTATTAGATATTCTTCTGAAGTCAAATCACAAGGAAATTCAGGACGATGAAAGCAACAAGAATGTTGGAATGAGTCTTAAAGATGTAATCGAGGAATGCAAATTATTTTACTTTGCAGGGCAGGAAACCACTTCAGTTTTGCTTGTTTGGACAATGGTCTTATTGAGTAGGTACCCTGATTGGCAAGCACGTGCAAGGGAGGAAGTATTGCAAATCTTTGGAAACCAAAAGTCAGATTTTGATGGGCTAAGTCACCTTAAGATTGTCACAATGATTTTGTATGAGGTTCTTAGGTTATACCCACCAGCACTTGTGCTTGCTCGAGCTGTTCGTAAAGATGTAAAACTTGGACACCTAACATTACCTGCTGGAGTGCATGTTTCCATACCAATAGTTATGCTTCACCATGACTGTGAACTATGGGGTGATGATGCTAAGGAGTTCAATCCTGAAAGATTTTCTGAAGGAGTTTTAAAGGCTACAAATGGCAGAGTTTCATTTTTCCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTTTCCTTGTTGGAAGCAAAGATGGCTTTGTCAATGATTTTACAAAGTTTCTCATTTGAACTTTCTCCATCCTATGCTCATGCTCCAGCTATGGTAATTACTCTTCAGCCACAATATGGGGCTCATATCATTCTGCGTAAAGTGGAAATATAA 1569 0.3952 MEAAWATAAGLIPMMLILVVLIWSWRLLNRLWLRPKKLERLLREQGLQGNPYRFLVGDLNEILKMGNEAKSKPMNLSDDIVPRVISYFQHSVNEHGKNSFIWFGPIPRVTLTDPELIKDVLNKIYDFPKLNTNSLLKLLATGLVTLDGEKWNKHRRIISPAFNLEKLKIMLPIFFESCNDLISKWKGMLSSDGLCEMDVWPFLQNLASDVISRTAFGSSYEEGKRIFQLQKEQAEITMKVIRKVYIPGWRFLPTTTHRRLKEIDKDIKALLNDMINKRMRALKAGEATNNDLLDILLKSNHKEIQDDESNKNVGMSLKDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPDWQARAREEVLQIFGNQKSDFDGLSHLKIVTMILYEVLRLYPPALVLARAVRKDVKLGHLTLPAGVHVSIPIVMLHHDCELWGDDAKEFNPERFSEGVLKATNGRVSFFPFGWGPRICIGQNFSLLEAKMALSMILQSFSFELSPSYAHAPAMVITLQPQYGAHIILRKVEI. 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06491 522 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 513 - -
Seca4g06491 522 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06491 522 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06491 522 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06491 522 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06491 522 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06491 522 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06491 522 CDD CYP72 85 516 - -
Seca4g06491 522 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06491 522 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06491 522 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06491 522 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06491 522 Gene3D Cytochrome P450 32 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06491 522 SUPERFAMILY Cytochrome P450 83 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g06491 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Seca4g06491 522 FunFam Cytochrome P450 734A1 32 521 - -
Seca4g06491 522 Pfam Cytochrome P450 87 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06491 Seca-Chr4 130369992 130374160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06491 7 520 Cytochrome P450 AT3G14690 55.922 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06491 - K23809 gmx:100777623 819.69