Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06464 ATGACAGATGTGCATGGAGATTCCACCGTGATTAATTGTGAACATAGATTTGAAAGTGCTCTTGAAGTCGACCATCTCAATGACGAACTACCATTAATACCTCCCTTAGAGCCTTTTGAAGGAATGGAGTTTGCATCAATTGAAGATGCAAAGAACTACTACACAAGGTACGCAAAGAACAAAGGTTTTAGTTTCCGTATGGGTCGTGTTACTAAATCAAGAACAAATGGTATGATAATTGGCCAAGAGATCCTTTGTTCAAAGGAAGGGTTTCGAAGAAAAAAAAACGTGGAAGGGGAAAATGGAAGCCTTGTAGCACATGATGAAACAAGAGTGGGATGGAAAGCAATGTTATATATAAAGAAAAATGAAGATGGATGGATTGTTTCTAGATTTATAAAAGACCATAATCATGAATTGTTCTCCCCAAGGAGTTCAAAGTTTCTTCGAGTGCATAGAAAGAAAACTAAGGTGCAAAAAAAGTTGATTGATGTGCTTGATGATTCTGGTCTGCGTCCAAGTCATCCCAGAAGTCTCCAACAATGCTTTAACTTTGCGTGA 561 0.3797 MTDVHGDSTVINCEHRFESALEVDHLNDELPLIPPLEPFEGMEFASIEDAKNYYTRYAKNKGFSFRMGRVTKSRTNGMIIGQEILCSKEGFRRKKNVEGENGSLVAHDETRVGWKAMLYIKKNEDGWIVSRFIKDHNHELFSPRSSKFLRVHRKKTKVQKKLIDVLDDSGLRPSHPRSLQQCFNFA. 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06464 186 Pfam FAR1 DNA-binding domain 52 141 IPR004330 -
Seca4g06464 186 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06464 Seca-Chr4 129830541 129831101 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g06464 FAR1 1.1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06464 - - tpra:123904109 257.299