Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06427 ATGTCTTGGAGCTCTATAATCACTGCATACTTTTCTGTGGCCTGTCTGTATAATGCTAACTTAAAATCTTATCAGGCTGAACAGGCTATTGCTAATGGTGTGGCTGCTGGACAGGCAATTGAACCCTCTTGTTGGATTCCTATATTACAGGGAAAGCATTGTATTCTTGCTGGTGATCATTGTCAACTTGCTCCTGTCATATTATCTAGAAAGGCCTTAGAAGGTGGTCTAGGAATATCTCTGTTGGAGAGAGCTTCAACTTTGCATGAAGGAACCCTTACTACCACATTAACAATTCTATCTAGTGCTCATGTTGTGCTTGCCACCAATACTGGAGCAGTTGTGTATTTGTTGAAAGTGTATCACTTGAGTCAGGTTGGTGCTGCCAATGTTGTTAGCATATGGTATGGAGTGGTGAATTTCATACCAATTGTTGGTGCCTCTGTTGCTGATGCCTCTTTAAGAAAATTCAGAACCATTGCCATGGCATCATTTGGAACACTTGTGGGAATGGTGATACTCACACTAACAGCATGGATGCTACAACTTCATCCTCCAAAGTGGACTTATGATCGTAAGCTGCAGGAAATGTGTGATCCCCCAACAAGTACTCAACTTAGCATCTTAATTTTTGGCCTATCATGGTTGGCTATAGGAACAGATGGAATTCGTCGGGTTGTTGGCGTTGTTGGTTATATCATAATGCCTCACAATGTATTCCTGTATTCCGCTTTAGTGCAGTCGAGGACGATTGATCCCAATAAGAAAGTTCGGGTACAAGAGGCTCTCAACTACTATTCAATTGAGTTGTTGGCTGCATTTTTAGTCTCCTTCATGATCAATCTATTTGTCACAACAGTTTCTGCTAAGGGTTTTTACGATACAAAGCAGACAACTAGCATAGGATTGGTGAATGCAGGGCAGTATGTTGAAGAAAAGTATGGAGGAGGACTCTTCCCTATTCTTGAGAGGGTGGCATGGACTGCTGCAGCTTTGATAATAGTAATTAATGGATATCTCTTAGTATATTTCTTCCCTTCTGAGATGAAGGGCCCACTTCTTGATTTTGTGGCCTGCTCCTGCACAGTTGAATGTGATGATGCTGATGTTGTTCAAAGCAATGTGAATAAGGAACCATCTTTAAAAAACGTTTTGTCAGATCCTTTGTCAGTTTATCTGGCTCATTGA 1188 0.4125 MSWSSIITAYFSVACLYNANLKSYQAEQAIANGVAAGQAIEPSCWIPILQGKHCILAGDHCQLAPVILSRKALEGGLGISLLERASTLHEGTLTTTLTILSSAHVVLATNTGAVVYLLKVYHLSQVGAANVVSIWYGVVNFIPIVGASVADASLRKFRTIAMASFGTLVGMVILTLTAWMLQLHPPKWTYDRKLQEMCDPPTSTQLSILIFGLSWLAIGTDGIRRVVGVVGYIIMPHNVFLYSALVQSRTIDPNKKVRVQEALNYYSIELLAAFLVSFMINLFVTTVSAKGFYDTKQTTSIGLVNAGQYVEEKYGGGLFPILERVAWTAAALIIVINGYLLVYFFPSEMKGPLLDFVACSCTVECDDADVVQSNVNKEPSLKNVLSDPLSVYLAH. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06427 395 Pfam AAA domain 36 69 IPR041677 GO:0004386
Seca4g06427 395 Gene3D - 36 98 IPR027417 -
Seca4g06427 395 Gene3D MFS general substrate transporter like domains 99 292 IPR036259 -
Seca4g06427 395 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 159 316 IPR001046 GO:0016020|GO:0030001|GO:0046873
Seca4g06427 395 Pfam Natural resistance-associated macrophage protein 220 333 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06427 Seca-Chr4 128884177 128885364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06427 320 362 Inorganic Solute Cotransporters AT1G47240 55.814 3.96e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06427 K21398 - sind:105159127 165.622