Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06401 ATGGAGATGCACGTAGGGGCTGTACAACAGGGAGAACGAGCCTTAGTCATATATGATCTTATTGCCACTGGGGGAACATTATGTGCTGCCATTAGGCTACTAGGTAAACTTGTCAACTTGAATGCTTTATTGGCAAAGAAAAACCCATTAACATGA 156 0.4231 MEMHVGAVQQGERALVIYDLIATGGTLCAAIRLLGKLVNLNALLAKKNPLT. 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06401 51 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 37 - -
Seca4g06401 51 CDD PRTases_typeI 1 34 IPR000836 -
Seca4g06401 51 Gene3D - 1 47 IPR029057 -
Seca4g06401 51 SUPERFAMILY PRTase-like 1 36 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06401 Seca-Chr4 127965192 127965347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06401 1 37 PRT Gene Family AT1G27450 72.973 1.44e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06401 K00759 - rcu:8288502 60.077