Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06371 ATGTTAATTGTTACGACCAGAGATGTACGCCTTCTTAAATTACTTAAAGTTGACCGTTTCTGTAGAATGAAAGAAATGGATGAAAATGAGTCCCTTGAGCTTTTCAGTTGGCATTTTGAAAGGACAAAACAAGAATGGAAAAATGTGTTATCAAAACTAGAGAGAATTCCCAATGATCAAGTGCAAGAGAAACTCAGAATAAGCTATGATAGTTTAAATGAAGATACGGAAAAGGATATATTTCTTGACATTTGTTGTTTTTTAATTGGTAAGGACAGAGCCTATGTTACGGAGATACTAAATGGCTGTGGACTATATGCTGATATTGGAATAACTGTCCTAGAGCGGTGCCTCCTAAAAGTTGAAAAGAATAACAAGCTCCAAATCCATGATTTGCTACGAGTCATGGAAGAACTTGGGCACGACTTATGA 432 0.3588 MLIVTTRDVRLLKLLKVDRFCRMKEMDENESLELFSWHFERTKQEWKNVLSKLERIPNDQVQEKLRISYDSLNEDTEKDIFLDICCFLIGKDRAYVTEILNGCGLYADIGITVLERCLLKVEKNNKLQIHDLLRVMEELGHDL. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06371 143 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 43 137 IPR044974 GO:0006952
Seca4g06371 143 Gene3D - 38 73 IPR042197 -
Seca4g06371 143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 84 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06371 Seca-Chr4 126473039 126473577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06371 1 134 WRKY Transcription Factor Family AT5G45050 27.326 9.06e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06371 - - cam:101511388 202.216