Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06360 ATGGACGTGGTAGGTGGTTCTGCAGCGGCAAGCCCATGTTCATCTTATCATCCAAGTCCCTGTGCTTCCTACAACCCAAGTCCAGGCTCTTCATCCTTTCCTAGCCCTCGCTCATCCTCCTATGCTGCAAATCCTAATGGCGATGGCAATTCCCTCATTCCATGGCTCAAAAACCTCTCATCTGGATCATCATCAGCATCCTCTTCCAAGCTTCCGCAGCTGTATATTCATAGTGGCTCCATCAGCGCTCCTGTCACTCCTCCACTTAGCTCTCCAACTGCCCGAACACCCCGAATGAAAGCTGACTGGGAGGAACAGTCCACTCGTCCTGGGTGGAGTGGGCCGCAGTACTCCTTCCTGCCCTCTTCCACTCCTCCAAGCCCTGGCCGCCAGGTTGACCCTGATTGGTTTGCTGGAATTAGAATTCCTCAGGGTGGACCAACTTCTCCAACCTTTAGCCTGGTCTCTTCTAACCCATTTGGCTTCAAGGAAGAGGTTTTCGTTGAAAGTGGTTCCCGCATGTGGACACCTGGACAAAGTGGGACATGTTCTCCAGCTGTAGCTGCAAGCTCTGACCACACTGCTGACATTCCCATGGCTGAAGCGGTCTCGGATGAATTTGCCTTTGGAAGCAGTGCAGCAGGTTTGGTGAAGCCCTGGAAAGGAGAGAGGATCCATGAAGATTTTGGATCAGATGATCTAGAGCTCACTCTTGGGAGCTCAAAGACCAGGTAA 735 0.5224 MDVVGGSAAASPCSSYHPSPCASYNPSPGSSSFPSPRSSSYAANPNGDGNSLIPWLKNLSSGSSSASSSKLPQLYIHSGSISAPVTPPLSSPTARTPRMKADWEEQSTRPGWSGPQYSFLPSSTPPSPGRQVDPDWFAGIRIPQGGPTSPTFSLVSSNPFGFKEEVFVESGSRMWTPGQSGTCSPAVAASSDHTADIPMAEAVSDEFAFGSSAAGLVKPWKGERIHEDFGSDDLELTLGSSKTR. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06360 244 MobiDBLite consensus disorder prediction 82 130 - -
Seca4g06360 244 MobiDBLite consensus disorder prediction 1 47 - -
Seca4g06360 244 Pfam BES1/BZR1 plant transcription factor, N-terminal 2 60 IPR008540 -
Seca4g06360 244 MobiDBLite consensus disorder prediction 12 47 - -
Seca4g06360 244 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 244 IPR033264 GO:0003700|GO:0006351|GO:0009742
Seca4g06360 244 MobiDBLite consensus disorder prediction 109 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06360 Seca-Chr4 126060923 126062249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06360 1 244 BZR Transcription Factor Family AT1G78700 66.142 1.48e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Seca4g06360 BES1_N 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06360 - - vvi:100241756 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06360 4 126060923 126062249 Seca4g06360 4 126060923 126062249 ECH