Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06340 ATGGAGCACATAGTTTCAACTTACAAGCGAACTGCAACTAAGGCTATCCTTCTGGATTATGACGAGCCTGCACTGAAGCTTTATACTGAAACAACTAATGGATCCACCATTCAGGATGCAGATCCAGATTTTGGATCTTGCCAAGCTAAAGAACTTCTTAATCGTCTTGAAAGTGTGCTTGCAAATGAACCAGTATCAGTCAAGAGTGGCCAGAACACTGTGGGGGTTAAATCACAGGTGCGTATAACATTTGTGGAATGA 261 0.4215 MEHIVSTYKRTATKAILLDYDEPALKLYTETTNGSTIQDADPDFGSCQAKELLNRLESVLANEPVSVKSGQNTVGVKSQVRITFVE. 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06340 86 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 23 80 IPR001830 GO:0003824|GO:0005992
Seca4g06340 86 Pfam Trehalose-phosphatase 38 80 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06340 Seca-Chr4 125533527 125534127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06340 22 79 Trehalose Biosynthesis Gene Families AT1G68020 66.667 1.46e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06340 K16055 - cave:132176996 93.2041