Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06331 ATGGAGAATCAGCAGCCGTCAGATGCAAAAAGGGCAATGGAACAAGAGCTAATCGAAGGGCGTGAGACAGCAAACCAGTTACTTGAAATACTTGTTCATAAATCAAATACTCACAATCACCATGGAGATCTAGAAGGGATAATATTATTACCTTTTGCTAGAGATCTTGTACACAAGGTACTAAGATCGTTCACAAATACCCTTTTGCTCTTGAACACCAATAGTGAGGAGGTTAAGGTTTTGCCTACAACTATCACAAATGTCTCTTCATCTGCAAGTTGTCCAAAGCCTGAAGATAAAGATGAGGCTTCCAGGAGTTTTACAAATGCTAAAAATCGAAGGGGCTGCTACAAAAGAAACTCAATTTTGACTGAAGATGGATATGCATGGAGAAAGTACGGACAAAAAAAGATACTGAATACAAAATACCTCAGGAGCTATTACAGATGCACTCACAAAGATGATCAGAATTGTCCAGCAATCAAAAAGGTGCAGAGAATTCAAGAGGACCCTCCATTGTATCGGACAACTTATTATGGCCATCACAATTGTAAAAGCTCTTTTATAAACCCAGAGGTGATAAAAGAACTTGATACTTCTTCTTCTTCTAGTTCTTCTATATTCCTTAACTTCAATAACAGCAGCCTCCCAAACAAAGAAGCATACCCGTTTTCATCTTCACTTTTTCCATCCACGAAACAAGAGCCTATGGAATTGATTTCTGATTATCATATTGGTTGA 741 0.3806 MENQQPSDAKRAMEQELIEGRETANQLLEILVHKSNTHNHHGDLEGIILLPFARDLVHKVLRSFTNTLLLLNTNSEEVKVLPTTITNVSSSASCPKPEDKDEASRSFTNAKNRRGCYKRNSILTEDGYAWRKYGQKKILNTKYLRSYYRCTHKDDQNCPAIKKVQRIQEDPPLYRTTYYGHHNCKSSFINPEVIKELDTSSSSSSSIFLNFNNSSLPNKEAYPFSSSLFPSTKQEPMELISDYHIG. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06331 246 Gene3D WRKY domain 110 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca4g06331 246 ProSiteProfiles WRKY domain profile. 119 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca4g06331 246 Pfam WRKY DNA -binding domain 125 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca4g06331 246 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca4g06331 246 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 202 IPR044810 GO:0003700
Seca4g06331 246 SUPERFAMILY WRKY DNA-binding domain 120 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca4g06331 246 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06331 Seca-Chr4 125365272 125367884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06331 16 192 WRKY Transcription Factor Family AT3G56400 34.921 5.39e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca4g06331 WRKY 8.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06331 - - gmx:102659367 277.33