Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06288 ATGTCCACTTCTCTCCCCTTTACCCAATTCTACAACTCATGGTTCGACCAGTTACGCCACCTGGTCCACCACCTATCCACGGTGCCCCTCACACCGGACCAAAACGAGGACCACCTTCTCCCCCTCGTCAACAAGGTCATGTCCCACCATGAAGACTACTTCCATGCCAAGTCACTCGCCACTGAGAAGGACCCACTCCACGTGTTGGCCTCTCCCTGGGTCACCACCATGGAACGTTCCCTTTATTGGATCACAGGGTGGCGCCCCACCACCGCCTTCCACCTCATCTACACCGAATCATCTCATCTCTTTGAGTCTCACATCATCGACATCCTTCGTGGCCTCCACACCGGTGACCTCGGTGATCTCTCCCCTGTTCAGTTCCAGCGAGTCAGCGAGTTGCAATGTGAAACCGTAGTGAAGGAAGAGAATGCAATCACAGATGAGTTATCAGAGTGGCAGGACAGTGTAAGTGAGATGATGGGACCAAGACCGGATCTTAACGAGAAGATCGGACGGCTGGTGATCATTATAAAGAAAGCGGATGATCTACGGCTGAAAACTCTGCGGAGCGTGGTGGGGTTGCTGTCGCCGCAGCAGGCTATCGAGTTCTTGATTGCTGCAGCAGAATTGCTTGTTGGGATCCGTGGTTGGGGATTGAATCATGACCGTGCACATCGTCGGTAA 687 0.5342 MSTSLPFTQFYNSWFDQLRHLVHHLSTVPLTPDQNEDHLLPLVNKVMSHHEDYFHAKSLATEKDPLHVLASPWVTTMERSLYWITGWRPTTAFHLIYTESSHLFESHIIDILRGLHTGDLGDLSPVQFQRVSELQCETVVKEENAITDELSEWQDSVSEMMGPRPDLNEKIGRLVIIIKKADDLRLKTLRSVVGLLSPQQAIEFLIAAAELLVGIRGWGLNHDRAHRR. 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06288 228 ProSiteProfiles DOG1 domain profile. 4 225 IPR025422 GO:0006351|GO:0043565
Seca4g06288 228 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 6 227 - -
Seca4g06288 228 Pfam Seed dormancy control 21 98 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06288 Seca-Chr4 124522967 124524597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06288 4 207 bZIP Transcription Factor Family AT5G06950 23.982 2.44e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06288 - - gsj:114374825 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06288 4 124522967 124524597 Seca4g06288 4 124522967 124524597 ECH