Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06271 ATGTTTATTTCTGATCTTTTGATGTTGAACTTACAAGAGGGTGGTGAAGCTGCTGCTGAAGAAACTAAGAAAAGTAATCATGTTCAGAGAAAACTTGAGAAGCACAAGAAATATCGTAAGCTTGATCCTCACATTGAAGAGCAGTTTGGTGGTGGTCGATTGCTAGCCTGTATTTCTTCTCGCCCTGGTCAATGTGGTCGGGCTGATGGGTACATTCTGGAAGGTAAGGAACTGGAATTTTACATGAAGAAATTACAAAAGAAGAAGGGAAAGGGTGCTGCTTAA 285 0.407 MFISDLLMLNLQEGGEAAAEETKKSNHVQRKLEKHKKYRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA. 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06271 94 Pfam Ribosomal protein S8e 45 73 IPR022309 -
Seca4g06271 94 PANTHER 40S RIBOSOMAL PROTEIN S8 16 91 IPR001047 GO:0003735|GO:0005840|GO:0006412
Seca4g06271 94 FunFam 40S ribosomal protein S8 38 91 - -
Seca4g06271 94 Gene3D - 5 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06271 Seca-Chr4 124305565 124306052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06271 15 82 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 78.261 2.37e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06271 K02995 - gmx:100500112 132.494