Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06257 ATGTGTTTTGAAATTGATTCAAGAGTTTTCAATGCTGGGGTAATGTGGTTTGCAGAAATGGTGGATGCCATGAAGAAGGTGGCGCAGATGGACGTTGAGTTGAGTGTGGAAGAAAGAAACTTGTTCTCTGTTGGGTACAAGAATGTGGTGGGGTCCCGGAGAGCTTCGTGGAGGATCCTTTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGGTGAATGTTAAGCGTATCAGGGAGTACATGCAGAAGGTGGAGTTGGAGCTGTCCAACATTTGCAATGACATTATGATAGTCTTAGATGAGCATCTTATTCCATCCACTAATGTTGCGGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGATTATTACCGGTATTTAGCTGAATTCAAAGCTGGTAATGAAAAGAAAGAGGTAGCAGATCAGTCACTGAAAGCATATCAGACAGCTTCTGCCACTGCTGAGAGTGAATTACAGCCTACACATCCTATCCGATTGGGTCTAGCTCTAAATTTCTCTGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAGCAAGCCTTTGATGATGCTGTCTCAGAGCTGGATACCCTGAATGAGGAATCTTACAAGGACAGTACCTTGATCATGCAGCTGTTGAGAGACAACCTTACTTTATGGACTTCTGATATCCCAGAAGATGGTGAGGACCAAAAAATGGAAAGCACAGCCAGGAGTGGTGAAAAGGAAGATGAGTTGGGCCGCTAA 771 0.4332 MCFEIDSRVFNAGVMWFAEMVDAMKKVAQMDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNEVNVKRIREYMQKVELELSNICNDIMIVLDEHLIPSTNVAESTVFYYKMKGDYYRYLAEFKAGNEKKEVADQSLKAYQTASATAESELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDAVSELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKMESTARSGEKEDELGR. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06257 256 SMART 1433_4 6 242 IPR023410 -
Seca4g06257 256 MobiDBLite consensus disorder prediction 233 256 - -
Seca4g06257 256 PRINTS 14-3-3 protein zeta signature 148 174 IPR000308 -
Seca4g06257 256 PRINTS 14-3-3 protein zeta signature 202 231 IPR000308 -
Seca4g06257 256 PRINTS 14-3-3 protein zeta signature 33 62 IPR000308 -
Seca4g06257 256 PRINTS 14-3-3 protein zeta signature 113 135 IPR000308 -
Seca4g06257 256 PRINTS 14-3-3 protein zeta signature 82 106 IPR000308 -
Seca4g06257 256 PRINTS 14-3-3 protein zeta signature 175 201 IPR000308 -
Seca4g06257 256 Gene3D - 13 244 IPR036815 -
Seca4g06257 256 PANTHER 14-3-3 PROTEIN 17 232 IPR000308 -
Seca4g06257 256 ProSitePatterns 14-3-3 proteins signature 2. 211 230 IPR023409 -
Seca4g06257 256 PIRSF 14-3-3 11 242 IPR000308 -
Seca4g06257 256 Pfam 14-3-3 protein 17 229 IPR023410 -
Seca4g06257 256 SUPERFAMILY 14-3-3 protein 21 237 IPR036815 -
Seca4g06257 256 FunFam 14-3-3 gamma 1 11 240 - -
Seca4g06257 256 MobiDBLite consensus disorder prediction 231 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06257 Seca-Chr4 123940260 123945206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06257 17 253 14-3-3 family AT2G42590 76.569 7.85e-137 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06257 K06630 - gmx:547574 434.876