Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06240 ATGCTTAACAATGGAGTGTGCAGTCTCCGCACGTGCCTCCGTCTCCCGGAGAGACCACTATTCCGAGCAGTTCCTCTCTCATTCAGTCACCGCCGGCGTTTTCTCGCCACCGCATCCGAAACTAAGAAGAAAGAGAAGGTGATAGTGATTTCTGGACCCACCGGTTCCGGCAAGAGCAGACTCGCATTGGAGCTCGCAAAACGCCTCAACGGCGAAATCGTCAGTGCCGACTCTGTCCAGGTATATCGGGGTCTTGATGTTGGATCTGCGAAGCCTTCCCTAAATGAAAGAAAGGAGGTACCGCATCATCTGGTTGACATACTTCACCCATCTGAAGAGCTTTTATTTTCCCCAATTAAAACTAATTATTATTCATCAGACTATTCTGTTGGGCAGTTTTTTGGGGATGCAAGGCTAGCTACAAGGTGTATTCTTGACAACAGCCGTGTACCCATAGTTGTTGGGGGCACTGGACTTTATTTAAGATGCCTGCTGATGAAGTCATTCATTTTATTAGCAATCTCACAGAAGAAGGTGAAGCTTGAACAAGATGAAGAAGCACAGAGAATTGAGAGAAGCAGCAGCAATCAGTCACCAATAGGCAGTTTTGAAAAGCACAAGTATGTTTGGAAGAGATTAGGGCTCACACATGATGGGAAAGAAGGTTTCGAGCAAGAGGAGATTAGGGCTATGGATATCATACAGACTGCTAGGCCTATGTTAAAAAACAAATCATTAGAAATGAATCCCAAAGGTTGGAACCACCAAAATCAATACAACCATATGGAAGGAATTTGTGGTGAAGCAGATGGAGAAAATGATGCTGATGATGGTGAAGAAAGACTGCATATTCTTGGTGACAAGTTTGCTGAAAGGAAATGA 882 0.4456 MLNNGVCSLRTCLRLPERPLFRAVPLSFSHRRRFLATASETKKKEKVIVISGPTGSGKSRLALELAKRLNGEIVSADSVQVYRGLDVGSAKPSLNERKEVPHHLVDILHPSEELLFSPIKTNYYSSDYSVGQFFGDARLATRCILDNSRVPIVVGGTGLYLRCLLMKSFILLAISQKKVKLEQDEEAQRIERSSSNQSPIGSFEKHKYVWKRLGLTHDGKEGFEQEEIRAMDIIQTARPMLKNKSLEMNPKGWNHQNQYNHMEGICGEADGENDADDGEERLHILGDKFAERK. 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06240 293 Pfam IPP transferase 80 188 - -
Seca4g06240 293 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 44 182 IPR039657 -
Seca4g06240 293 Gene3D - 43 248 IPR027417 -
Seca4g06240 293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 173 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06240 Seca-Chr4 123483520 123486678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06240 50 171 C2H2 Transcription Factor Family AT2G27760 36.066 1.33e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06240 K00791 - gmx:100808814 248.44