Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06228 ATGATAGACCGGACAGTTCCGTCGAGGTTGATTGAAGATGTTGCTGCTACTCGGATTCAAAATGCATTTCGTTCATTTATGGCAAGAAGAACATTTCAACATCTAAGAGGAGCAGTGAAATTTGAAGCTTTAATTCAAGACCACATGGCCAGAGAGCAAACAGCAACTGCACTTAACTATATACATTCATGGAGCAGAATACAGGATCAAATTAGAGCTCGCAGAATCTGTATGATAACAGAAGCTAGAATTAAGCAAAAGAAATTGGAAAACCAGTTAAAACTTGAAGCTAAGATTCATGAGCTCGAGGTAGTGGAATGGTGCAGTGGTTCTGAAACAATGGAAGAGATACTTTCCAGGATACATCAGCGAGAAGAAGCAGCAATTAAACGAGAAAGAGCCATGGCATATGCCTTCTCTCATCAGTGGAGGCCAAACTGTAGCCAGTATTTTGGTCAGGCTTCCTATAGCCTTGGTAAAGAAAGTTGGGGTTGGAGCTGGACGGAGCGTTGGGTTGCAGCACGTCCTTGGGAAGTCCGGGTTAGAGTTCACTCCCCCCAAACAAAGAAACTCAATGGACAGCAGCATAAAACCAAATTAGATAAGATAAACCACAATGAAAGCAAAGTGCCCTTGTCTAAACCTGCCCTGTCAAATGGGAAGGAGACTGAGAAAGGGAAGAAAAACAGCTCTTGA 696 0.4282 MIDRTVPSRLIEDVAATRIQNAFRSFMARRTFQHLRGAVKFEALIQDHMAREQTATALNYIHSWSRIQDQIRARRICMITEARIKQKKLENQLKLEAKIHELEVVEWCSGSETMEEILSRIHQREEAAIKRERAMAYAFSHQWRPNCSQYFGQASYSLGKESWGWSWTERWVAARPWEVRVRVHSPQTKKLNGQQHKTKLDKINHNESKVPLSKPALSNGKETEKGKKNSS. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06228 231 MobiDBLite consensus disorder prediction 194 208 - -
Seca4g06228 231 MobiDBLite consensus disorder prediction 185 231 - -
Seca4g06228 231 Pfam IQ calmodulin-binding motif 15 33 IPR000048 GO:0005515
Seca4g06228 231 ProSiteProfiles IQ motif profile. 12 40 IPR000048 GO:0005515
Seca4g06228 231 Gene3D iswi atpase 8 36 - -
Seca4g06228 231 PANTHER IQ-DOMAIN 5-RELATED 10 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06228 Seca-Chr4 123062132 123065924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06228 8 211 IQD Protein Family AT3G15050 57.353 4.67e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06228 - - gmx:100809360 404.06