Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06204 ATGTCCTACTTAGAACATCATATCAAAAGCCTTGAAGTGGCTTCCTCTTCCTACCACAAAGTTTTGGAGGAGAACCGTCTTCTTTATAATCAAGTACAGGACCTCAAAGGAGCCATTAGGGTCTATTGTAGAGTGAGACCCTTCTTACCAGGGCAATCAAATGGACGATCTACAATAGACTATATTGGTGAAAATGGAGACTTGATGATTGTAAATCCCCTTAAGCAGGGAAAAGAAGCAAGAAGGATATTTTCATTCAATAAGGTGTTTGGAACAAGCGTAACACAAGAACAATTTTATGTTGACACTCAACCATTGGTTTGGTCTGTGCTAGATGGTTATAATGTAGGGTCGCAATTTGGTACCCTACAGCCAAAGAGGGTTTTGGTATCTTCTTGTTATATTTTTTATTGA 414 0.3865 MSYLEHHIKSLEVASSSYHKVLEENRLLYNQVQDLKGAIRVYCRVRPFLPGQSNGRSTIDYIGENGDLMIVNPLKQGKEARRIFSFNKVFGTSVTQEQFYVDTQPLVWSVLDGYNVGSQFGTLQPKRVLVSSCYIFY. 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06204 137 Gene3D Kinesin motor domain 1 120 IPR036961 -
Seca4g06204 137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 116 IPR027417 -
Seca4g06204 137 Pfam Microtubule binding 24 116 IPR031852 GO:0008017
Seca4g06204 137 ProSiteProfiles Kinesin motor domain profile. 38 137 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca4g06204 137 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 116 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06204 Seca-Chr4 122222336 122223358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06204 29 116 Calmodulin-binding Proteins AT5G65930 36.559 4.68e-14 66.2