Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06168 ATGGTGGGCTCAGGAGCAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAAGCGTCTGTCTCAACTCAGACTGGACTTACTCTGTCTTCTGGACTATTCGTCCTCGCCCAAGAGTCAGAGGTGGTAATGGCTGCAAGGTTGGGGATGATAATGGCAGCTTGATGTTGATGTGGGAAGATGGATTTTGCCGAGGAAGAGCTTCGGGTTGTCTGGAAGATATTGATGGAGAGGATCCTGTCAGAAAAGCCTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGTCACAAGTGGGTCTTCAAAGAGCCCACTGAGTGTGAGCCAAATATCTCTAACTACTGGCAGAGCTCTTTTGATGCTGTATGTATTTCAACTCTTTCCTATATCCAATCATAG 456 0.4649 MVGSGAASDRSKEAVGMMALHEALRSVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRASGCLEDIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDAVCISTLSYIQS. 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06168 151 PANTHER GB|AAF34833.1 1 141 IPR044170 -
Seca4g06168 151 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 75 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06168 Seca-Chr4 121066063 121067206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06168 21 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.894 7.00e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06168 - - zju:107432509 288.5