Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06157 ATGGAGCTTCAGAAACATTTTTGCCTCTTTTTATTTCTCTTTAGTTTCCTCTCAGGCTCTCAAGCTTATACATTTTATGTTGGAGGAAAAGATGGGTGGGTTTTGAACCCTTCTGAGAATTACAATCATTGGGCTGAGAGGAACAGGTTCCAAGTCAGTGACACTCTTGTTTTTAAGTACAAGAAGGGATCAAATTCTGTGTTGGTGGTGAACAAGGATGATTATGATCAATGCAACAAGAAGAACCCCATCAAGAAGTTAGAGGATGGTGACTCTGAGTTTCAGTTTGATCGATCAGGTCCTTTTTACTTCATCAGTGGCAAAGATGATAATTGTGAAAAGGGACAGAAACTGATTATTGTGGTAATGGCTGTGAGAGAACAACAGCATCATAATCCACCTCCTTTACCATATGTTCCAATTCCTCCCAAAACTCCTCCTCCTCATATTCCAACACCTCCTCAAACTCCTCCCTATGTTCCAACACCTCCACATAATCCTCCTGTGATTCATCCTCCCTATGTTCCAACTCCACCAAAAGCTCCATCCCCTGTGAACCACCCTCCATATGTTCCAACACCTCCACAAACTCCTTCCCCTGTTTACAGTCCTCCTTATGTTCCAACACCTCCAAAAACACCATCTCCTGTTTATAGTCCTCCCTATGTTCCTACCCCTCCAAAATCTCCCTCACCTATTAATCCACCTTATGTTCCAACACCTCCAAAAACACCATCTCCTGTTTACAGTCCTCCCTATGTTCCTACTCCTCCAAAAGCTCCTTCACCTATTCATCCACCATATGTCCCAACACCTCCAAAAACACCTTCCCCTGTTTACAGTCCTCCCAGTGTTCCTACTCCTCCAAAATCCCCTTCCCCTATTCATCCACCCTATGTACCAATCATACCTCCAAAAGCACCTTCTCCTGTGTATAGCCCTCCCAATGTTCCTCCTACTCCAAAAGCTCCATCACCTATTCATCATCCACCTTATGTTCCAATTACACCTCCAAAAGCTCCTTCTCCAGTGTATAGCCCTCCCAGTGTTCCTACTCCACCAAAAACTCCTTCACCTATTCATTATCCACCTTATGTTCCAATTACACCTCCAAAATCACCTTCTCCTGGTTATAGTCCTCCCAATGTTCCTACTCCTCCAAAAGCTCCTTCACCTATTCATCCACCTTATGTTCCAATTACACCTCCAAAATCACCTTCTCCTAGTTATAGTCCTCCCAATGTCCCTAGTCCTCCAAAGGCTCCATCACCTATTCATCCACCTTATGTTCCAATTACACCTCCAAAATCACCTTCTCCTGGTTATAGTCCTCCCAATGTTCCTACTCCTTCACCTACCAATCATCCACCCTTTGTTCCAATACCTCCAAAAACTCCTTCTCCTTCTTATAGTCCTCCCAATGTTCCTACTCCACCAAAAGCTCCTTCCCCTGGCAATCAGCCTCCCTATGTACCAACTCCTCCAAAAACTCCTTCTCCTATTTCTCAGCCTCCCTACATTCCAACACCTCCAAAAACTCCCTCTCCTTCTTATAGTCCTCCCAATGTTCCTACTACTCCAAGAGCTCCTTCCCCAGGCCAACACACTCCATATACTCCAACTCCTCCAAAAACTCCCTCTCCTGTTTCTCAGCCTCCCTACATTCCAACACCTCCAAAAACTCCCTCTCCTGTCTATAGCCCTCCTAATGTTCCAACTCCTCCAAAAGCCCCTTCCCCTGGCCAACACACTCCATATGTTCCAACACCTCCAAAAACCCCTTCTCCCATTTCTCAACCTCCATATGTTCAAACACCTCCAGGAACTCCTCCTATTTCCCAACCTCCATATGTTTCAACACCTCCAAACACTCCTTCCCCAATTTCCCAACCTCCCTATGTCCAAACACCTCCAGGAACTCCTTCTCCTATTTCCCAACCTCCACATGTTTCAACACCTCCAAACACTCCTTCCCCAATTTCTCAGCCTCCATATGTTCAAACACCTCCAGGCACCCCTTCTCCTATTTCCCAACCACCATATATTCCAACACCTCCAAACACTCCTTCCCCAATATCTCAACCACCCTACATCCATACACCTCCAAACACTCCTTCTCCATATTCTCAGCCACCCTATCTCCCAACTCCTCCAAAATCCACTTCCCCCATCTCTCAACCCCCAGTAGCACTAACACCCTCTGGGATAGCACCAGTTTCACCATCACCACTAACACCTATATCTCCATACCCACCAGCCAACCCTCCCTCAACATCACTCTCACCATCTCAGGCACCTTTAGTTTCTCCGGCAATCACTCCGGCGAGTGCTCCGGTGCCGGCCACAACATCACCACCGTCAATGGCCCCATCAGCCACCACTCCAGCCGCATCACCCCCGGCGTCCCTTCCGGCAGCAGCAACTCCATCACCGTCGTCCACGACTCCCGGATCACCCAAAACGCCATCGTCGTCTAATGAAACGGCACCAGCCAGACCAAACGGAGCGTCGTCTGCAACTCCTTCAGGATTGTGGGTGTATTCACTTACCATTTTGGTCGGTGCTGCTCTCACCACTATTCTTGGATAG 2589 0.4735 MELQKHFCLFLFLFSFLSGSQAYTFYVGGKDGWVLNPSENYNHWAERNRFQVSDTLVFKYKKGSNSVLVVNKDDYDQCNKKNPIKKLEDGDSEFQFDRSGPFYFISGKDDNCEKGQKLIIVVMAVREQQHHNPPPLPYVPIPPKTPPPHIPTPPQTPPYVPTPPHNPPVIHPPYVPTPPKAPSPVNHPPYVPTPPQTPSPVYSPPYVPTPPKTPSPVYSPPYVPTPPKSPSPINPPYVPTPPKTPSPVYSPPYVPTPPKAPSPIHPPYVPTPPKTPSPVYSPPSVPTPPKSPSPIHPPYVPIIPPKAPSPVYSPPNVPPTPKAPSPIHHPPYVPITPPKAPSPVYSPPSVPTPPKTPSPIHYPPYVPITPPKSPSPGYSPPNVPTPPKAPSPIHPPYVPITPPKSPSPSYSPPNVPSPPKAPSPIHPPYVPITPPKSPSPGYSPPNVPTPSPTNHPPFVPIPPKTPSPSYSPPNVPTPPKAPSPGNQPPYVPTPPKTPSPISQPPYIPTPPKTPSPSYSPPNVPTTPRAPSPGQHTPYTPTPPKTPSPVSQPPYIPTPPKTPSPVYSPPNVPTPPKAPSPGQHTPYVPTPPKTPSPISQPPYVQTPPGTPPISQPPYVSTPPNTPSPISQPPYVQTPPGTPSPISQPPHVSTPPNTPSPISQPPYVQTPPGTPSPISQPPYIPTPPNTPSPISQPPYIHTPPNTPSPYSQPPYLPTPPKSTSPISQPPVALTPSGIAPVSPSPLTPISPYPPANPPSTSLSPSQAPLVSPAITPASAPVPATTSPPSMAPSATTPAASPPASLPAAATPSPSSTTPGSPKTPSSSNETAPARPNGASSATPSGLWVYSLTILVGAALTTILG. 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06157 862 MobiDBLite consensus disorder prediction 739 759 - -
Seca4g06157 862 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Seca4g06157 862 MobiDBLite consensus disorder prediction 131 207 - -
Seca4g06157 862 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Seca4g06157 862 FunFam Early nodulin-like protein 1 22 127 - -
Seca4g06157 862 PANTHER BLUE COPPER PROTEIN 23 170 IPR039391 GO:0009055
Seca4g06157 862 Gene3D - 21 127 IPR008972 -
Seca4g06157 862 MobiDBLite consensus disorder prediction 807 841 - -
Seca4g06157 862 MobiDBLite consensus disorder prediction 264 841 - -
Seca4g06157 862 MobiDBLite consensus disorder prediction 219 239 - -
Seca4g06157 862 CDD OsENODL1_like 23 123 IPR041846 -
Seca4g06157 862 MobiDBLite consensus disorder prediction 133 207 - -
Seca4g06157 862 MobiDBLite consensus disorder prediction 264 724 - -
Seca4g06157 862 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06157 Seca-Chr4 120831778 120834477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06157 3 164 Phytocyanin Superfamily AT4G27520 49.383 2.20e-50 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06157 - - cam:101495711 268.085