Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06093 ATGGAGAAGAAAACACTAGCTGGATTGTGCTTCCTCTTCCTCGTTCTCTTCGTTGCTCAAGAAGTTGTGGTGCAAACTGAGGCAAAGACTTGTGAGAACCTGGCTGATACATTCAGGGGCCCATGCTTCACCTCTGCTAGCTGCGATGATCACTGCAAGAATAAAGAGCACTTAATTAGTGGCAGGTGCAGGGACGACTTCCGCTGTTGGTGCACCAAAAACTGTTAA 228 0.4781 MEKKTLAGLCFLFLVLFVAQEVVVQTEAKTCENLADTFRGPCFTSASCDDHCKNKEHLISGRCRDDFRCWCTKNC. 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06093 75 Pfam Gamma-thionin family 29 75 - -
Seca4g06093 75 SUPERFAMILY Scorpion toxin-like 29 75 IPR036574 -
Seca4g06093 75 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Seca4g06093 75 CDD Knot1 40 72 IPR003614 GO:0006952
Seca4g06093 75 Gene3D - 29 75 IPR036574 -
Seca4g06093 75 PANTHER DEFENSIN-LIKE PROTEIN 1 4 75 - -
Seca4g06093 75 SMART gth_4 30 75 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06093 Seca-Chr4 119554130 119554857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06093 1 75 Plant Defensins Gene Families AT2G02130 32.895 2.28e-10 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06093 - - gmx:100779239 157.918