Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06065 ATGTCTTACTTATATGAAAGGACAAAACAAGAATGGAAAAGTGTAATATCAAGACTAGAGAGAATTCCCAATGATCAAGTGCAAGAGAAACTCAGAATAAGTTATAATGGTTTAAAGAATGATATGGAAAAGGATATATTTCTTGATATATGTTGTTTCTTTATCGGTAAAGACAGAGGCTATGTTACAGAGATACTAAATGGCTGTGGACTTTATGCTGATATTGGAATAACTGTCCTCATAGAGCGGTGCCTCCTAAAAGTTGAAAAGAATAACAAGCTCCAAATGCATGATTTGCTACGAGACATGGGAAGAGAAATCATCCGTGAAAGTTCAACAAAAGAGCCTGAGAAGCGTAGTTGA 363 0.3526 MSYLYERTKQEWKSVISRLERIPNDQVQEKLRISYNGLKNDMEKDIFLDICCFFIGKDRGYVTEILNGCGLYADIGITVLIERCLLKVEKNNKLQMHDLLRDMGREIIRESSTKEPEKRS. 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06065 120 SUPERFAMILY "Winged helix" DNA-binding domain 26 112 IPR036390 -
Seca4g06065 120 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 120 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06065 Seca-Chr4 118431948 118432315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06065 18 120 WRKY Transcription Factor Family AT5G45050 40.777 3.05e-21 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06065 - - tpra:123923836 210.305