Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05992 ATGGATTGGAGGCCTAGTGTTGACAAAGAATTTGATGATCCTGAAGAAGCCTGGCATTTTTGGGTAGAATACGATTCAAAAATGGGTTTTGGAGTTAGAAAAAATTACTTCAACAAAAGAAAGAAAGATGGTTCCATTACATCTTGTAGATTTGTTTGTTGTAAGGAGGGGAAGAAGAATAACAAACCATCCTTGGTTAAAAAGCCCAGGGCTGATACAAGAACTGAGTGTCAAGCAAGAATAGCACTTGTTGCGAAAAACGGCAAGTTTGTAATTCATGAGTTTGTAGAGAACCATAACCATCCTTTACAACTTGTAGAAACAACCCATATGCTAGCATCACACCGTAAAATTTCATAA 360 0.3694 MDWRPSVDKEFDDPEEAWHFWVEYDSKMGFGVRKNYFNKRKKDGSITSCRFVCCKEGKKNNKPSLVKKPRADTRTECQARIALVAKNGKFVIHEFVENHNHPLQLVETTHMLASHRKIS. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05992 119 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 118 - -
Seca4g05992 119 Pfam FAR1 DNA-binding domain 20 104 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05992 Seca-Chr4 116312162 116312521 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g05992 FAR1 3e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05992 - - aprc:113870350 176.792