Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05991 ATGGATTTCGAATCCGAATTCCCCATCCTTCTTAGCAGAAGGGAACTGGAAGTTATTGGATACTACAAGGAGATCGAGTCCGAATTCATAGCCGCTGAGAACTTCTTCAACAATCCCCTAAACATTCTTATTCGGAGACATGCCGTTTCTATAATCGCTAGGCACTCGCAGGGTGAAGATCCTGACTCATATATTCCCTATATTGCCATGAACTATTTTGATCGCTACGTTTCTAGGAATTCACTGGAAGTAATGGATGTAGAAGGTGCTGATGATATTGACAAAATTCGCTTGGTTGCTATCTGTTGCCTCACTCTTTCTGCCAAGATGAGGACAAAGTCCTTCTCTGTTGATCGGTTTCTGGTAAACAAACAGAGGGAAAGATTTGTGAATATCGATCATTCGAGTATAATGACAATGGAGCTTCGCATTGTGAATCGTCTTAGCTGGCGAATGCGATCTGTGACTCCCTTTTGCTTTCTTGACCACTATTACCCTGTATTTAGATGGTTAGGTGGTTTCAAGCGTCGTTGCATCAATGAGATCATAGTCCAGGCTCAAGGAGAAACCCAATTTGTTCATTACACGCCATCTCAGATTGCATTCTCCGCTTTTCTAGCTGCTACCCTCATTGCATATCCCTCAAAGTTTGACAAAATTGAAAAACGGGGGGTGCCGAGCAGGTGTTGGGAAGAGCTGCTTAAATTTTGTCTCGAGAAGAACATCGAGATTGAGCTCGGTGGGTCAGGAATTGCTTCCGCTTCAAGTTCAAGTAACCCAACAAAGAAAGAGGCAACCCAAGAAAGAAAGAGCAAGGCGATAGCGATACCGACACGGGTACGGGTTCTGGATTCTTTTGAACAACTTGGAGAAGCTGAGACTGATTTAATCCCACGAAAACGAGTCAGGCCCAGGGAGGAGACTGTGGCTGAGGCAAACGAACGAATACAGAACATGCGCAATGCGATGGAGGTGACATCTGACGAAGAAATAGCAGCCGAGACTGAGGCACTCATGAACAGACTGGAGAAGCAGAGGGAGGAGAGGCTCAATGCCGCGCTGGGGGAAAGGGAGGCCTTGATGGCGCTAGCCTTTGGTGAGGAAATAGAATCGGATATTGAGGCAGAACTGGACAAGGACAAGGTGGCCGAGACAGCAGATGAAAATGTAGAAATAGAATCGGATACTGAGGCAGAACTGGACAAGGACAAGGTGGCCGAGACATCAGATGAAAATGTAGCAGCCCCGGTTGAGGCAAACCAATCAAAACTGGACGAGGACAAGGTGGCCGAAACATCAGATCAAAATGTCGCAGCCCAGATTGAGGCAGACCAACCAAAACTGGACGACGACAAGGTGGCCGAGACATCAGATGAAAATGTCGCAGCCCAGATTGAGGCAAGCCAATCAAAACTAGATGAGGGTAAGGTGGCCGAGACATCAGATGAAAATGTCGCTGCCCAGATTGAGGCAAGCCAACCAAAACTAGATGAGGGTAAGGTGGCCGAGACATCAGATGAAAATGTCGCAGCCCAGATTGAGGCAAGCCAACCAAAACTAGATGAGGGTAAGGTGGCCGAGACATCTGATGAAAATGTCGCAGCCCCAAACCAACCAAAACTGGACGAGGGCAAGGAAGCAGTGTTGGCTGAGGTGAAGAAGAAGCAGAAGGGGAAATCCATTTTGGAAATCATTCCTGCAGCAGATGCTGTACCAAAGAAGCTAATGAACTTTGACCTCAAGTGGCCGATTGTGATTGATGTCCCCACCTTTGAAAGCGAACAGCAAGATGAGCCGATAGAGGAGTCCCGAACCTTAAGCATTCGGTGTCCTGAAACAATACAGGGGCCCGGCAGTGGCAATGATGTTGGTAGTCCTTCAAGTGCCAACCCTTGTGGTTGTGGCTGGGGCCACTGCAGCATCGGTTAG 1929 0.4774 MDFESEFPILLSRRELEVIGYYKEIESEFIAAENFFNNPLNILIRRHAVSIIARHSQGEDPDSYIPYIAMNYFDRYVSRNSLEVMDVEGADDIDKIRLVAICCLTLSAKMRTKSFSVDRFLVNKQRERFVNIDHSSIMTMELRIVNRLSWRMRSVTPFCFLDHYYPVFRWLGGFKRRCINEIIVQAQGETQFVHYTPSQIAFSAFLAATLIAYPSKFDKIEKRGVPSRCWEELLKFCLEKNIEIELGGSGIASASSSSNPTKKEATQERKSKAIAIPTRVRVLDSFEQLGEAETDLIPRKRVRPREETVAEANERIQNMRNAMEVTSDEEIAAETEALMNRLEKQREERLNAALGEREALMALAFGEEIESDIEAELDKDKVAETADENVEIESDTEAELDKDKVAETSDENVAAPVEANQSKLDEDKVAETSDQNVAAQIEADQPKLDDDKVAETSDENVAAQIEASQSKLDEGKVAETSDENVAAQIEASQPKLDEGKVAETSDENVAAQIEASQPKLDEGKVAETSDENVAAPNQPKLDEGKEAVLAEVKKKQKGKSILEIIPAADAVPKKLMNFDLKWPIVIDVPTFESEQQDEPIEESRTLSIRCPETIQGPGSGNDVGSPSSANPCGCGWGHCSIG. 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05991 642 Gene3D - 37 147 - -
Seca4g05991 642 Gene3D - 148 264 - -
Seca4g05991 642 PANTHER CYCLINS 64 233 IPR039361 -
Seca4g05991 642 SUPERFAMILY Cyclin-like 12 152 IPR036915 -
Seca4g05991 642 MobiDBLite consensus disorder prediction 515 538 - -
Seca4g05991 642 Coils Coil 309 352 - -
Seca4g05991 642 MobiDBLite consensus disorder prediction 611 628 - -
Seca4g05991 642 Pfam Cyclin, N-terminal domain 18 152 IPR006671 -
Seca4g05991 642 MobiDBLite consensus disorder prediction 378 484 - -
Seca4g05991 642 MobiDBLite consensus disorder prediction 611 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05991 Seca-Chr4 116305495 116308377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05991 45 223 Core Cell Cycle Gene Families AT4G03270 31.183 3.24e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05991 - K18812 aprc:113855478 275.018