Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05983 ATGGCCTCTGAGAGAACCAACTTGAATGAGGATACCAAGAAACCCCTTTGTGCTTGTGAGGATTCCAAGGCTGAACCTGGCAGAAGCAGAGGAAGAAAGACCAATGTGAAGGGTCCTAAGAAAGCACCACAGAGAGGCTTGGGTGTGGAAAAGTTGGAGAGGTTGAGGATTCAAGAGTCATGGAAGAAGATGGCTGAAGCATCTGGAGTTCCAACCCTCCATGATCCTCACCTTCTCCAGTGCCACCCTCCAATGTTTGGCAGTGGAAGTGTTCCCATGAGGTATGGTGCACCATCACCAAACCATGCCCATGGTGGGTTTCAGTGCCCTCATCAACAAGTGATGATGAATGGGAACACTGTTCCTTTCATTGGGAACAAGGGTGGGATGAATGTGCTTGGTGGGGGTGGTTCTAATGTTGCTGCAGGGTGGCTTATGCCTAATCAGGTCAACAGGGTGGGTCCCTATGGATCTGGACCTTCACTTTTGGGTCCTCTTGTTGGAACCCCTCTTGAGACCTCCAAAGAGCTCTCTTCAATGCCAAATGTGCATTATTCTCAACCTGAATGTCTTGATCTTTGCCTCAAGAAAACACGTCTCAATGAGGACAATGTAAAAGGATCAAATGCAAGGAGAGACAGACCCATTGTTGTCCATGATTTTATGGGATATATGCCCCATTCTGCAGCCCCAAACCTTGTCGGAGAAACCGGTGATTTCTACAACAAACTGGCCAGGCATGATGCTAATGCAATCCCTGATGAGTGTGCGGAGGTTGTTGCGGTTCACAGGAGGGGAAACTCAGTGAGTGGCAGTGGCAGAGTTTTCATGGAATATGAGTTTTTCCCAGGAAAAGATGGCAGAGGCACTACTTCCAAGGAGCTGAAATTGCTAACAAAATTAGGTTCAGCTGCAGTAGGCCATGAAGCTTCTTCTTCTACAGCCTATGGAGATACTGCTTCTAATTCTATTGATTTGTCTCTGAAGCTTTCACGCTAG 999 0.4755 MASERTNLNEDTKKPLCACEDSKAEPGRSRGRKTNVKGPKKAPQRGLGVEKLERLRIQESWKKMAEASGVPTLHDPHLLQCHPPMFGSGSVPMRYGAPSPNHAHGGFQCPHQQVMMNGNTVPFIGNKGGMNVLGGGGSNVAAGWLMPNQVNRVGPYGSGPSLLGPLVGTPLETSKELSSMPNVHYSQPECLDLCLKKTRLNEDNVKGSNARRDRPIVVHDFMGYMPHSAAPNLVGETGDFYNKLARHDANAIPDECAEVVAVHRRGNSVSGSGRVFMEYEFFPGKDGRGTTSKELKLLTKLGSAAVGHEASSSTAYGDTASNSIDLSLKLSR. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05983 332 PANTHER OS01G0212500 PROTEIN 11 330 IPR040356 GO:0003700
Seca4g05983 332 MobiDBLite consensus disorder prediction 7 32 - -
Seca4g05983 332 Pfam Plant transcription factor NOZZLE 20 69 IPR014855 GO:0003700
Seca4g05983 332 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05983 Seca-Chr4 116198387 116199968 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NOZZLE Seca4g05983 NOZZLE 0.00013 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05983 - - lang:109348179 269.626