Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05854 ATGAGGGCTTTCAAGGAGGCAGTTTCCTCCTACACAATAGTAATACTCGTGTTGTTGTTGTCATTGAGTTTCGAGGTTTGTCATGGACAAGGCTTCAAGCCGGCGTCTCCTCCACCGGTGCCGGAGCTCGACAGCTGTGATGGTATTTTCTTGACGTACAGTTTGCTTGGGCGGGTGAAGGAATATCCGCACGTGAAAAACATGTCGAAACAAGCATGGGCGTTTAAAGCAGAGGCTTCGTTGATGAACGTAGGGGATGAGGAGCTTAAAGGGTGGAAGATGTTCATTGGATTCCAACACAGGGAGATTCTTGTGTCGGCGGATGGCGCTGTTCCTATTGACTCTGAGGATTTTCCGTCCGATGTGAGCAATGGAACCACCCTTGCCGGTAACCCTGTGACGGACTTGAAGACCGCCATTGAGACCGCTGGGGATTATAACCAGATGGCTGTGAGGGTTCAGATGACTGGGACTCAGTTTGGCCTCGGTGCTGGTGCCACCCCAATGCCCAAATCTATCAAACTAGTTAATGATGGCTTCAAATGCCCTGGACCTAGTCGTAAAGGGTCGAGAATGTTTGTATGCTGCAGAAAGGACCCGAAAGCCAAGGCTAAGCTAGCCAAGAAAACCAAGTTCCTTCCTCGTCGCTATGGAGATCTAACAATTGCATACGACGTGCTTCAAGCCTTCCAAACCAACTACTACGCCCAGGTGACTATTGAAAACAACCACCCATTAGGACGTCTTGATCATTGGAACTTGACATGGGAATGGCAGAAAGGAGAGTTCATTTACTCAATGAAAGGAGCCTTTGCTCGCATTAAGGACCCTTCTGAGTGCTTATATGGCCCTGCTGGCAAGTACTATAGAGACTTGGATTTCTCACAAGTTGCAAACTGTCAGAAAAAGCCTATCATCTCTGATCTCCCTTCTGAAAAAGCAGAGGATGAGAAGCTTGGAAAACTCCCCTGGTGTTGTAGGAATGGCACTGTCTTGCCTCCCATCATGGACAAGAACAAAGCAAGATCCATGTTTCAGTTACAAGTCTTCAAGATGCCACCTGATGACAACAGAACTGCTCTCACCCCACCTATGAAATGGAACATTGATGGGGTTATCAATCCAAAATACACATGTGGACCTCCAATTAGAGTTGACCCACAAGAGTTCCCTGACCCAGCTGGGCTTAAAGCAATTTCCACAGCTGTGGCTAGTTGGCAAATTGTCTGCAACATGACCAAACCAAAGCCTCAGCAAAACCGTTGCTGTGTCTCATTCTCAGCATTCTATAATGAATCTGCTATCCCTTGCAATACCTGTGCTTGTGGTTGTGATGAAACAAGGAATTGCAACTCCAAAGCCTCTCCATTACTTCTTCCACCTGATGCTCTTCTTGTGCCTTTTGTCAATAGAACCTTAAAGGCACGTGCTTGGGCCAAGCTCAAACACTTGCATGTGCCTAGCAAATTGCCTTGTGGAGATAACTGCCCTGTTAGCATCAATTGGCATGTCAGCTCAGACCACAAGGAAGGATGGACAGCTAGGATCACTCTTTTCAACTGGGGTAACAATGCCTTTGATGATTGGTTCACGGGCATCCAGTTTAAGAGGTCTTTTGATGAATTTGAAGATGTGTATTCCTTCAATGGGACTAGAATTCCTGGTATCAAAACCATCTTCTTCCAAGGCCTAAAGGGTTTGAATTACTTGGTTGGAGAGACCAATGGAACCCGTGTTGGGGACCCAAGGGTGCCTGGAAAGCAGCAATCTGTGATTTCTTTCAATAAGAAGCACATTAAAGACTTTGATGTTACACATGATGCGTTCCCTACTAAGGTTTTCTTCAATGGAATGGAGTGTGCAATTCCTCCAATCAGACCTGCCAAAAGTTCAGGGCATAAATCTTCCATCCGTGTCCTTGCTGTCATTTGCACAGCTTTTATAACCTTTTTCCTGAAGACAGATCGCTTTTACTGA 1977 0.4623 MRAFKEAVSSYTIVILVLLLSLSFEVCHGQGFKPASPPPVPELDSCDGIFLTYSLLGRVKEYPHVKNMSKQAWAFKAEASLMNVGDEELKGWKMFIGFQHREILVSADGAVPIDSEDFPSDVSNGTTLAGNPVTDLKTAIETAGDYNQMAVRVQMTGTQFGLGAGATPMPKSIKLVNDGFKCPGPSRKGSRMFVCCRKDPKAKAKLAKKTKFLPRRYGDLTIAYDVLQAFQTNYYAQVTIENNHPLGRLDHWNLTWEWQKGEFIYSMKGAFARIKDPSECLYGPAGKYYRDLDFSQVANCQKKPIISDLPSEKAEDEKLGKLPWCCRNGTVLPPIMDKNKARSMFQLQVFKMPPDDNRTALTPPMKWNIDGVINPKYTCGPPIRVDPQEFPDPAGLKAISTAVASWQIVCNMTKPKPQQNRCCVSFSAFYNESAIPCNTCACGCDETRNCNSKASPLLLPPDALLVPFVNRTLKARAWAKLKHLHVPSKLPCGDNCPVSINWHVSSDHKEGWTARITLFNWGNNAFDDWFTGIQFKRSFDEFEDVYSFNGTRIPGIKTIFFQGLKGLNYLVGETNGTRVGDPRVPGKQQSVISFNKKHIKDFDVTHDAFPTKVFFNGMECAIPPIRPAKSSGHKSSIRVLAVICTAFITFFLKTDRFY. 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05854 658 PANTHER COBRA-LIKE PROTEIN 7 11 652 - -
Seca4g05854 658 Pfam COBRA-like protein 234 413 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05854 Seca-Chr4 112206253 112210025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05854 11 651 COBRA Gene Family AT3G20580 60.856 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05854 - - gmx:100789175 1093.57