Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05852 ATGCATCTGATACCTACAAAAACCCCATTGATGGTCCAACTTATTGCATCACTCTATTTTCAACATTTCCAGCATTTTGGTTGCAATACCCACTTGCCCCTTCTCAGTTCCTCATTGATTGATATGGCTAACACCATTTTAATGTCTAATGAAGTAGCTCATGCCTTGGGCTTGTTCTGTCTCCTGATGTTGGTGCACAGGGGTGATGCCTATCAATTCGTAGTTGGAGGTCAAAAGGGTTGGAATGTTCCTAGTGACCCCAATTCCAATCCTTACAATCAATGGGCAGAAAAGAGCCGATTTCAAATAGGGGACTCCCTAGTGTTCAATTACCCTTCTGGCCAGGACTCAGTAATTCAAGTAAATAGCCAAGACTATGCCAGTTGCAACACTGATGCACATTCTGAAAAATTCTCTGACGGCCACACAATCATCAAACTCAATCAATCTGGGTCTCACTTCTTCATAAGTGGAAACAAAGATAACTGTCTCAAGAATGAGAAATTGGTGGTGATTGTTTTGGCTGACAGAACCAACAGAAACTCAAACACCAACCAAACAAACACTGCTCCTTCTACCTCTCCTTCTCATTCTCCTTCACCATCATTCTCAACAGAGTCATCAGCTCCTTCACCAGCACCTGCTCAGCAAGATGTAACATCTCCACCACCTGCAGGGACTATGGAGACCCCACCACCTGTTCAGCAAGATGCCACATCTCCACCACCAGGGACTGAGGTGACAAACCCAACTCCAGCTCCAGCTCCTGTTAGTGAACCTCCTCCTCCTAATGCTGCTTCTTCATTCTTGGTCAGCTTTGCTGGTTCTGTTGGTGCATTCATGGCTACAGTTCTGGTTTTATCTTTCTAA 870 0.4471 MHLIPTKTPLMVQLIASLYFQHFQHFGCNTHLPLLSSSLIDMANTILMSNEVAHALGLFCLLMLVHRGDAYQFVVGGQKGWNVPSDPNSNPYNQWAEKSRFQIGDSLVFNYPSGQDSVIQVNSQDYASCNTDAHSEKFSDGHTIIKLNQSGSHFFISGNKDNCLKNEKLVVIVLADRTNRNSNTNQTNTAPSTSPSHSPSPSFSTESSAPSPAPAQQDVTSPPPAGTMETPPPVQQDATSPPPGTEVTNPTPAPAPVSEPPPPNAASSFLVSFAGSVGAFMATVLVLSF. 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05852 289 Gene3D - 71 187 IPR008972 -
Seca4g05852 289 Pfam Plastocyanin-like domain 81 165 IPR003245 GO:0009055
Seca4g05852 289 PANTHER BLUE COPPER PROTEIN 71 200 IPR039391 GO:0009055
Seca4g05852 289 MobiDBLite consensus disorder prediction 225 263 - -
Seca4g05852 289 SUPERFAMILY Cupredoxins 70 174 IPR008972 -
Seca4g05852 289 MobiDBLite consensus disorder prediction 180 224 - -
Seca4g05852 289 MobiDBLite consensus disorder prediction 180 267 - -
Seca4g05852 289 CDD OsENODL1_like 71 174 IPR041846 -
Seca4g05852 289 ProSiteProfiles Phytocyanin domain profile. 71 175 IPR003245 GO:0009055
Seca4g05852 289 FunFam Early nodulin-like protein 9 71 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05852 Seca-Chr4 112167052 112169098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05852 55 270 Phytocyanin Superfamily AT3G20570 46.296 3.01e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05852 - - gmx:100788637 303.908